Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RNU7-106P-201ENST00000459514 67 ntBASIC1.16□□□□□ -2.22
WNT3AP56704 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
WNT3AP56704 RMST_2.1-201ENST00000617263 136 ntBASIC1.16□□□□□ -2.22
WNT3AP56704 RNY1P4-201ENST00000384595 115 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 RNU6-291P-201ENST00000384720 107 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 MIR635-201ENST00000384830 98 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 MIR200A-201ENST00000384875 90 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 RNU6-321P-201ENST00000410912 106 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 RNU7-195P-201ENST00000458793 62 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 AL136317.1-201ENST00000612653 226 ntBASIC1.15□□□□□ -2.23
WNT3AP56704 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
WNT3AP56704 MIR494-201ENST00000349529 81 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 Y_RNA.17-201ENST00000362433 111 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 RNU6-243P-201ENST00000391140 107 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 Y_RNA.593-201ENST00000410292 98 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 AC092628.1-201ENST00000436250 252 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 RNU6-448P-201ENST00000517052 107 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 MIR548H5-201ENST00000580314 60 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
WNT3AP56704 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
WNT3AP56704 Y_RNA.56-201ENST00000362798 112 ntBASIC1.13□□□□□ -2.23
WNT3AP56704 RNU6-1254P-201ENST00000391266 104 ntBASIC1.13□□□□□ -2.23
WNT3AP56704 RNU6-402P-201ENST00000410678 103 ntBASIC1.13□□□□□ -2.23
WNT3AP56704 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
WNT3AP56704 Y_RNA.164-201ENST00000363709 102 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNA5SP245-201ENST00000364239 121 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 SNORD114-24-201ENST00000365029 72 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNU6-519P-201ENST00000410590 108 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 snoU13.11-201ENST00000459219 104 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNU6-1110P-201ENST00000516462 101 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNU7-10P-201ENST00000607194 63 ntBASIC1.12□□□□□ -2.23
WNT3AP56704 RNY1P10-201ENST00000363268 113 ntBASIC1.11□□□□□ -2.23
WNT3AP56704 SNORD116-22-201ENST00000384430 92 ntBASIC1.11□□□□□ -2.23
WNT3AP56704 U7.7-201ENST00000459276 60 ntBASIC1.11□□□□□ -2.23
WNT3AP56704 RNU6-267P-201ENST00000516714 103 ntBASIC1.11□□□□□ -2.23
WNT3AP56704 MIR4668-201ENST00000582284 70 ntBASIC1.11□□□□□ -2.23
WNT3AP56704 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
WNT3AP56704 Y_RNA.32-201ENST00000362589 110 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 SNORD36A-201ENST00000362874 73 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 Y_RNA.327-201ENST00000365201 102 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 AL161932.1-201ENST00000437408 146 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 Y_RNA.809-201ENST00000516058 95 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 AP003327.1-201ENST00000529684 127 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 AC062037.1-201ENST00000605302 128 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.1□□□□□ -2.23
WNT3AP56704 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
WNT3AP56704 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
WNT3AP56704 Y_RNA.73-201ENST00000362910 113 ntBASIC1.09□□□□□ -2.23
WNT3AP56704 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
WNT3AP56704 MIR599-201ENST00000385069 95 ntBASIC1.09□□□□□ -2.23
WNT3AP56704 SNORA26.2-201ENST00000390922 122 ntBASIC1.09□□□□□ -2.23
WNT3AP56704 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
WNT3AP56704 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
WNT3AP56704 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
WNT3AP56704 MIR337-201ENST00000362281 93 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 MIR450A2-201ENST00000385022 100 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 SNORA31.14-201ENST00000516728 116 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 AC138907.6-201ENST00000568401 126 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 AC138869.1-201ENST00000568623 124 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 IGLL4P-201ENST00000614590 133 ntBASIC1.08□□□□□ -2.24
WNT3AP56704 RNU6-957P-201ENST00000363652 99 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 RNY1P1-201ENST00000364372 112 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 RNU6-466P-201ENST00000391224 103 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 RNY4P29-201ENST00000410801 97 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 RNU7-85P-201ENST00000458851 63 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 Y_RNA.648-201ENST00000459455 110 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 RNA5SP255-201ENST00000516370 107 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
WNT3AP56704 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.07□□□□□ -2.24
WNT3AP56704 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 Y_RNA.221-201ENST00000364248 96 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 RNU6-219P-201ENST00000364728 107 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 Y_RNA.283-201ENST00000364798 112 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 Y_RNA.620-201ENST00000411009 88 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 AL606490.4-201ENST00000423117 127 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 AC097635.1-201ENST00000450678 155 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 RN7SKP12-201ENST00000516275 143 ntBASIC1.06□□□□□ -2.24
WNT3AP56704 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
WNT3AP56704 Y_RNA.226-201ENST00000364337 114 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 SNORD115-27-201ENST00000364430 82 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 Y_RNA.388-201ENST00000383919 113 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.05□□□□□ -2.24
WNT3AP56704 uc_338.16-201ENST00000621804 95 ntBASIC1.05□□□□□ -2.24
WNT3AP56704 RNA5SP117-201ENST00000365294 118 ntBASIC1.04□□□□□ -2.24
WNT3AP56704 MIR644A-201ENST00000385262 94 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 359.5 ms