Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNU6-12P-201ENST00000384604 107 ntBASIC1.08□□□□□ -2.24
PER3P56645 RNU6-41P-201ENST00000384741 107 ntBASIC1.08□□□□□ -2.24
PER3P56645 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.08□□□□□ -2.24
PER3P56645 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
PER3P56645 SNORD45B-201ENST00000364617 72 ntBASIC1.07□□□□□ -2.24
PER3P56645 Y_RNA.348-201ENST00000365403 103 ntBASIC1.07□□□□□ -2.24
PER3P56645 Y_RNA.467-201ENST00000384297 102 ntBASIC1.07□□□□□ -2.24
PER3P56645 SNORD100-201ENST00000408573 76 ntBASIC1.07□□□□□ -2.24
PER3P56645 RNA5SP89-201ENST00000410300 108 ntBASIC1.07□□□□□ -2.24
PER3P56645 RNU6-168P-201ENST00000516189 101 ntBASIC1.07□□□□□ -2.24
PER3P56645 RNU6-850P-201ENST00000516934 103 ntBASIC1.07□□□□□ -2.24
PER3P56645 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
PER3P56645 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PER3P56645 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PER3P56645 RNU6-571P-201ENST00000384128 107 ntBASIC1.06□□□□□ -2.24
PER3P56645 Y_RNA.544-201ENST00000384650 113 ntBASIC1.06□□□□□ -2.24
PER3P56645 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
PER3P56645 Y_RNA.567-201ENST00000384736 106 ntBASIC1.06□□□□□ -2.24
PER3P56645 MTATP6P29-201ENST00000415057 132 ntBASIC1.06□□□□□ -2.24
PER3P56645 AC004941.2-201ENST00000427009 228 ntBASIC1.06□□□□□ -2.24
PER3P56645 RNU6-448P-201ENST00000517052 107 ntBASIC1.06□□□□□ -2.24
PER3P56645 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
PER3P56645 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
PER3P56645 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
PER3P56645 Y_RNA.536-201ENST00000384621 113 ntBASIC1.05□□□□□ -2.24
PER3P56645 Y_RNA.697-201ENST00000516776 113 ntBASIC1.05□□□□□ -2.24
PER3P56645 MIR4439-201ENST00000583746 80 ntBASIC1.05□□□□□ -2.24
PER3P56645 MIR101-2-201ENST00000362195 79 ntBASIC1.04□□□□□ -2.24
PER3P56645 Y_RNA.56-201ENST00000362798 112 ntBASIC1.04□□□□□ -2.24
PER3P56645 Y_RNA.93-201ENST00000363066 109 ntBASIC1.04□□□□□ -2.24
PER3P56645 RNU6-1244P-201ENST00000363614 108 ntBASIC1.04□□□□□ -2.24
PER3P56645 RNA5SP325-201ENST00000363756 130 ntBASIC1.04□□□□□ -2.24
PER3P56645 RNA5SP245-201ENST00000364239 121 ntBASIC1.04□□□□□ -2.24
PER3P56645 RNU6-905P-201ENST00000384434 107 ntBASIC1.04□□□□□ -2.24
PER3P56645 TRAJ51-201ENST00000504127 63 ntBASIC1.04□□□□□ -2.24
PER3P56645 AC025627.3-201ENST00000582078 182 ntBASIC1.04□□□□□ -2.24
PER3P56645 Y_RNA.107-201ENST00000363190 121 ntBASIC1.03□□□□□ -2.24
PER3P56645 RNU6-640P-201ENST00000363693 105 ntBASIC1.03□□□□□ -2.24
PER3P56645 MTATP8P2-201ENST00000435212 202 ntBASIC1.03□□□□□ -2.24
PER3P56645 RNU6-158P-201ENST00000517104 100 ntBASIC1.03□□□□□ -2.24
PER3P56645 uc_338.16-201ENST00000621804 95 ntBASIC1.03□□□□□ -2.24
PER3P56645 RNU6-535P-201ENST00000384722 107 ntBASIC1.02□□□□□ -2.25
PER3P56645 RNU6-644P-201ENST00000391155 98 ntBASIC1.02□□□□□ -2.25
PER3P56645 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
PER3P56645 RNU7-106P-201ENST00000459514 67 ntBASIC1.02□□□□□ -2.25
PER3P56645 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
PER3P56645 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
PER3P56645 Y_RNA.342-201ENST00000365352 113 ntBASIC1.01□□□□□ -2.25
PER3P56645 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
PER3P56645 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
PER3P56645 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
PER3P56645 AC092628.1-201ENST00000436250 252 ntBASIC1.01□□□□□ -2.25
PER3P56645 RNU7-61P-201ENST00000515897 61 ntBASIC1.01□□□□□ -2.25
PER3P56645 MIR5000-201ENST00000577717 103 ntBASIC1.01□□□□□ -2.25
PER3P56645 MIR635-201ENST00000384830 98 ntBASIC1□□□□□ -2.25
PER3P56645 MIR516A2-201ENST00000384888 90 ntBASIC1□□□□□ -2.25
PER3P56645 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
PER3P56645 MIR516A1-201ENST00000385033 90 ntBASIC1□□□□□ -2.25
PER3P56645 SNORD63B-201ENST00000411005 70 ntBASIC1□□□□□ -2.25
PER3P56645 AC244098.3-201ENST00000424803 96 ntBASIC1□□□□□ -2.25
PER3P56645 SNORA40.13-201ENST00000516379 120 ntBASIC1□□□□□ -2.25
PER3P56645 Y_RNA.677-201ENST00000516401 85 ntBASIC1□□□□□ -2.25
PER3P56645 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
PER3P56645 MIR548H5-201ENST00000580314 60 ntBASIC1□□□□□ -2.25
PER3P56645 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1□□□□□ -2.25
PER3P56645 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
PER3P56645 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1□□□□□ -2.25
PER3P56645 Y_RNA.205-201ENST00000364128 113 ntBASIC0.99□□□□□ -2.25
PER3P56645 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
PER3P56645 AC103810.7-201ENST00000607821 91 ntBASIC0.99□□□□□ -2.25
PER3P56645 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
PER3P56645 Y_RNA.57-201ENST00000362806 113 ntBASIC0.98□□□□□ -2.25
PER3P56645 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PER3P56645 MIR3612-201ENST00000579753 87 ntBASIC0.98□□□□□ -2.25
PER3P56645 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
PER3P56645 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
PER3P56645 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
PER3P56645 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
PER3P56645 SNORD36A-201ENST00000362874 73 ntBASIC0.97□□□□□ -2.25
PER3P56645 MIR216A-201ENST00000385063 110 ntBASIC0.97□□□□□ -2.25
PER3P56645 MIR519A1-201ENST00000385257 85 ntBASIC0.97□□□□□ -2.25
PER3P56645 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
PER3P56645 Y_RNA.705-201ENST00000516862 110 ntBASIC0.97□□□□□ -2.25
PER3P56645 AC011195.1-201ENST00000578177 177 ntBASIC0.97□□□□□ -2.25
PER3P56645 AC025521.1-201ENST00000621624 286 ntBASIC0.97□□□□□ -2.25
PER3P56645 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
PER3P56645 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PER3P56645 MIR488-201ENST00000365739 83 ntBASIC0.96□□□□□ -2.26
PER3P56645 RNU7-195P-201ENST00000458793 62 ntBASIC0.96□□□□□ -2.26
PER3P56645 RNU7-10P-201ENST00000607194 63 ntBASIC0.96□□□□□ -2.26
PER3P56645 RNU6-1125P-201ENST00000363601 107 ntBASIC0.95□□□□□ -2.26
PER3P56645 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
PER3P56645 RNU6-480P-201ENST00000384332 107 ntBASIC0.95□□□□□ -2.26
PER3P56645 MIR644A-201ENST00000385262 94 ntBASIC0.95□□□□□ -2.26
PER3P56645 RNU6-887P-201ENST00000410660 100 ntBASIC0.95□□□□□ -2.26
PER3P56645 AC244505.6-201ENST00000452829 130 ntBASIC0.95□□□□□ -2.26
PER3P56645 AC138907.6-201ENST00000568401 126 ntBASIC0.95□□□□□ -2.26
PER3P56645 AC138869.1-201ENST00000568623 124 ntBASIC0.95□□□□□ -2.26
PER3P56645 AL513043.2-201ENST00000573941 143 ntBASIC0.95□□□□□ -2.26
PER3P56645 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms