Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC087741.2-201ENST00000619415 172 ntBASIC-0.46□□□□□ -2.48
PKNOX1P55347 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 SNORD49B-201ENST00000365172 72 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 MIR519E-201ENST00000385075 84 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 SNORD37.2-201ENST00000391075 66 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 RNA5SP300-201ENST00000391197 107 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.47□□□□□ -2.48
PKNOX1P55347 MIR4473-201ENST00000583731 91 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.47□□□□□ -2.48
PKNOX1P55347 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 MIR516A2-201ENST00000384888 90 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 MIR516A1-201ENST00000385033 90 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 MT-TI-201ENST00000387365 69 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 AC096531.1-201ENST00000419107 107 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 AL118496.2-201ENST00000448300 230 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.48□□□□□ -2.49
PKNOX1P55347 AC130289.1-201ENST00000577321 73 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.48□□□□□ -2.49
PKNOX1P55347 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 MIR617-201ENST00000385030 97 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 AC244250.2-201ENST00000418731 148 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 RNU6-327P-201ENST00000516270 127 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 MIR5589-201ENST00000579442 60 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 MIR8064-201ENST00000612863 90 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 MIR6507-201ENST00000613630 70 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 AC069503.3-201ENST00000618674 145 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 U4.1-201ENST00000620349 87 ntBASIC-0.49□□□□□ -2.49
PKNOX1P55347 SNORD115-19-201ENST00000363098 82 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 SNORD115-18-201ENST00000363293 82 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 SNORD115-17-201ENST00000364612 82 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 RNU7-6P-201ENST00000516845 62 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 RNU7-188P-201ENST00000517063 64 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 AP001180.6-201ENST00000584918 159 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 AC141273.2-201ENST00000618989 130 ntBASIC-0.5□□□□□ -2.49
PKNOX1P55347 MIR655-201ENST00000362159 97 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 SNORD115-44-201ENST00000365391 82 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 RNU6-811P-201ENST00000384069 107 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 RNU6-521P-201ENST00000516663 105 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 IGKV1-22-201ENST00000524313 326 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.51□□□□□ -2.49
PKNOX1P55347 RNA5SP98-201ENST00000363158 137 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 U8.6-201ENST00000364939 135 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 YWHAEP2-201ENST00000580066 112 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 MIR4503-201ENST00000582187 83 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 AC072026.1-201ENST00000605023 201 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 AL162726.3-218ENST00000636401 95 ntBASIC-0.52□□□□□ -2.49
PKNOX1P55347 RNA5SP205-201ENST00000364653 136 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 MIR181B2-201ENST00000385004 89 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 MIR2113-201ENST00000459007 91 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 MIR4636-201ENST00000582271 80 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 MIR548AE1-201ENST00000583292 70 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
PKNOX1P55347 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 uc_338.10-201ENST00000621872 182 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 MIR1255B1-201ENST00000636325 63 ntBASIC-0.54□□□□□ -2.5
PKNOX1P55347 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 SNORA51.5-201ENST00000384126 131 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 RNU7-197P-201ENST00000458836 62 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 MIR3121-201ENST00000579680 77 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 MIR3163-201ENST00000581592 73 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 MIR4263-201ENST00000584745 83 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 AC021753.1-201ENST00000635724 168 ntBASIC-0.55□□□□□ -2.5
PKNOX1P55347 SNORD114-11-201ENST00000363738 75 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 SNORD38.2-201ENST00000384470 69 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 RNU6-287P-201ENST00000516230 98 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 MIR4460-201ENST00000577862 86 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 TRDV1-202ENST00000621643 102 ntBASIC-0.56□□□□□ -2.5
PKNOX1P55347 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU4-11P-201ENST00000365287 132 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU6-574P-201ENST00000384265 107 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 AL161932.1-201ENST00000437408 146 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 MTND3P2-201ENST00000438452 342 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU6-175P-201ENST00000516896 107 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 AL590491.3-201ENST00000610731 82 ntBASIC-0.57□□□□□ -2.5
PKNOX1P55347 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.57□□□□□ -2.5
PKNOX1P55347 SNORD36A-201ENST00000362874 73 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.58□□□□□ -2.5
PKNOX1P55347 RNU6-460P-201ENST00000391158 108 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms