Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
HCFC1P51610 MIR4639-201ENST00000584938 69 ntBASIC0.52□□□□□ -2.33
HCFC1P51610 SNRPGP12-201ENST00000449481 213 ntBASIC0.52□□□□□ -2.33
HCFC1P51610 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.52□□□□□ -2.33
HCFC1P51610 RNU6-469P-201ENST00000516253 101 ntBASIC0.52□□□□□ -2.33
HCFC1P51610 RNU6-1099P-201ENST00000363533 107 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 SNORD38.1-201ENST00000363863 68 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 RNU6-726P-201ENST00000364680 107 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 SNORD116-21-201ENST00000384507 92 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 Y_RNA.567-201ENST00000384736 106 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 RNU4-83P-201ENST00000410863 133 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 Y_RNA.709-201ENST00000516952 92 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 AC092634.7-201ENST00000621022 103 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 uc_338.16-201ENST00000621804 95 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
HCFC1P51610 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.51□□□□□ -2.33
HCFC1P51610 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
HCFC1P51610 Y_RNA.549-201ENST00000384657 102 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 TRAJ51-201ENST00000504127 63 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-521P-201ENST00000516663 105 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-1006P-201ENST00000516998 103 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 MTND5P40-201ENST00000559945 246 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 MIR548AI-201ENST00000579940 88 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 AC020891.4-201ENST00000605745 93 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 AP001362.1-201ENST00000625165 124 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-816P-201ENST00000390914 107 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-1307P-201ENST00000391012 103 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-1268P-201ENST00000391214 107 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-1239P-201ENST00000391310 107 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU7-61P-201ENST00000515897 61 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 AC244669.1-204ENST00000621564 178 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 AL035470.1-201ENST00000622571 220 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.5□□□□□ -2.33
HCFC1P51610 AC091304.10-201ENST00000641554 121 ntBASIC0.5□□□□□ -2.33
HCFC1P51610 RNU6-1163P-201ENST00000364516 107 ntBASIC0.49□□□□□ -2.33
HCFC1P51610 SNORD45B-201ENST00000364617 72 ntBASIC0.49□□□□□ -2.33
HCFC1P51610 MIR548A1-201ENST00000385041 97 ntBASIC0.49□□□□□ -2.33
HCFC1P51610 RNU7-161P-201ENST00000517289 62 ntBASIC0.49□□□□□ -2.33
HCFC1P51610 U8.6-201ENST00000364939 135 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNY3P2-201ENST00000362918 102 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 Y_RNA.115-201ENST00000363272 98 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNU6-509P-201ENST00000363519 107 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNU6-110P-201ENST00000384508 104 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 SNORD20-201ENST00000384550 80 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 MIR516A2-201ENST00000384888 90 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 MIR516A1-201ENST00000385033 90 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 SNORA19.1-201ENST00000410656 129 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 ACA64.5-201ENST00000516207 127 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNU6-919P-201ENST00000516731 104 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNU6-90P-201ENST00000606352 106 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 MIR8087-201ENST00000612745 78 ntBASIC0.48□□□□□ -2.33
HCFC1P51610 RNU6-554P-201ENST00000410466 106 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 MIR4676-201ENST00000583078 72 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 Y_RNA.677-201ENST00000516401 85 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 MIR3613-201ENST00000579844 87 ntBASIC0.47□□□□□ -2.33
HCFC1P51610 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
HCFC1P51610 RNU6-1260P-201ENST00000362944 107 ntBASIC0.46□□□□□ -2.34
HCFC1P51610 RNU6-571P-201ENST00000384128 107 ntBASIC0.46□□□□□ -2.34
HCFC1P51610 RNU6-616P-201ENST00000384353 107 ntBASIC0.46□□□□□ -2.34
HCFC1P51610 RNU6-1254P-201ENST00000391266 104 ntBASIC0.46□□□□□ -2.34
HCFC1P51610 Y_RNA.818-201ENST00000618813 71 ntBASIC0.46□□□□□ -2.34
HCFC1P51610 Y_RNA.119-201ENST00000363301 96 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 Y_RNA.348-201ENST00000365403 103 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 MIR548L-201ENST00000408303 86 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 AC073869.9-201ENST00000641610 120 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 SNORD36A-201ENST00000362874 73 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 SNORD28-201ENST00000384706 75 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 MIR34C-201ENST00000384831 77 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 MIR617-201ENST00000385030 97 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 RNU6-243P-201ENST00000391140 107 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 RNU6-1064P-201ENST00000410626 104 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 MIR2052-201ENST00000636055 55 ntBASIC0.45□□□□□ -2.34
HCFC1P51610 Y_RNA.10-201ENST00000362371 110 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6-170P-201ENST00000362832 104 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6-106P-201ENST00000384405 107 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6-313P-201ENST00000516317 112 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 RNU6-850P-201ENST00000516934 103 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 AC068339.1-201ENST00000526965 141 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 MIR3612-201ENST00000579753 87 ntBASIC0.44□□□□□ -2.34
HCFC1P51610 SNORA63.4-201ENST00000362763 126 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.56-201ENST00000362798 112 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.78-201ENST00000362970 110 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.247-201ENST00000364500 92 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.377-201ENST00000365644 108 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 MIR4694-201ENST00000578534 80 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 MIR2909-201ENST00000617113 69 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms