Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 U6.95-201ENST00000636931 70 ntBASIC0.57□□□□□ -2.32
CDK7P50613 RNU6-363P-201ENST00000362895 105 ntBASIC0.56□□□□□ -2.32
CDK7P50613 MIR548L-201ENST00000408303 86 ntBASIC0.56□□□□□ -2.32
CDK7P50613 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.56□□□□□ -2.32
CDK7P50613 SNORD33.1-201ENST00000516213 88 ntBASIC0.56□□□□□ -2.32
CDK7P50613 RNU6-659P-201ENST00000516454 104 ntBASIC0.56□□□□□ -2.32
CDK7P50613 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
CDK7P50613 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
CDK7P50613 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
CDK7P50613 MIR3914-2-201ENST00000637339 95 ntBASIC0.56□□□□□ -2.32
CDK7P50613 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
CDK7P50613 SNORD115-24-201ENST00000363528 82 ntBASIC0.55□□□□□ -2.32
CDK7P50613 SNORD18A-201ENST00000363753 72 ntBASIC0.55□□□□□ -2.32
CDK7P50613 RNA5SP517-201ENST00000364724 117 ntBASIC0.55□□□□□ -2.32
CDK7P50613 RNU6-959P-201ENST00000384671 107 ntBASIC0.55□□□□□ -2.32
CDK7P50613 RNA5SP227-201ENST00000516184 113 ntBASIC0.55□□□□□ -2.32
CDK7P50613 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
CDK7P50613 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CDK7P50613 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
CDK7P50613 Y_RNA.433-201ENST00000384089 102 ntBASIC0.54□□□□□ -2.32
CDK7P50613 MIR1912-201ENST00000410389 80 ntBASIC0.54□□□□□ -2.32
CDK7P50613 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
CDK7P50613 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
CDK7P50613 Y_RNA.712-201ENST00000517011 92 ntBASIC0.54□□□□□ -2.32
CDK7P50613 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
CDK7P50613 AL603908.1-201ENST00000406098 201 ntBASIC0.53□□□□□ -2.32
CDK7P50613 AC008267.6-201ENST00000441664 139 ntBASIC0.53□□□□□ -2.32
CDK7P50613 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
CDK7P50613 RNA5SP268-201ENST00000516828 124 ntBASIC0.53□□□□□ -2.32
CDK7P50613 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.53□□□□□ -2.32
CDK7P50613 AL670379.3-201ENST00000605040 251 ntBASIC0.53□□□□□ -2.32
CDK7P50613 AC244669.1-204ENST00000621564 178 ntBASIC0.53□□□□□ -2.32
CDK7P50613 AL162726.3-218ENST00000636401 95 ntBASIC0.53□□□□□ -2.32
CDK7P50613 Y_RNA.221-201ENST00000364248 96 ntBASIC0.52□□□□□ -2.33
CDK7P50613 Y_RNA.261-201ENST00000364631 102 ntBASIC0.52□□□□□ -2.33
CDK7P50613 Y_RNA.309-201ENST00000365046 111 ntBASIC0.52□□□□□ -2.33
CDK7P50613 SNORA8.2-201ENST00000384372 139 ntBASIC0.52□□□□□ -2.33
CDK7P50613 MIR548I2-201ENST00000408348 149 ntBASIC0.52□□□□□ -2.33
CDK7P50613 RPL39P34-201ENST00000477141 156 ntBASIC0.52□□□□□ -2.33
CDK7P50613 TRAJ51-201ENST00000504127 63 ntBASIC0.52□□□□□ -2.33
CDK7P50613 MIR4639-201ENST00000584938 69 ntBASIC0.52□□□□□ -2.33
CDK7P50613 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
CDK7P50613 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDK7P50613 SNORD28-201ENST00000384706 75 ntBASIC0.51□□□□□ -2.33
CDK7P50613 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
CDK7P50613 RNU6-62P-201ENST00000516526 102 ntBASIC0.51□□□□□ -2.33
CDK7P50613 RNU6-170P-201ENST00000362832 104 ntBASIC0.5□□□□□ -2.33
CDK7P50613 MIR599-201ENST00000385069 95 ntBASIC0.5□□□□□ -2.33
CDK7P50613 SNORD63B-201ENST00000411005 70 ntBASIC0.5□□□□□ -2.33
CDK7P50613 RNU6-850P-201ENST00000516934 103 ntBASIC0.5□□□□□ -2.33
CDK7P50613 RNU6-90P-201ENST00000606352 106 ntBASIC0.5□□□□□ -2.33
CDK7P50613 SNORA36.1-201ENST00000363424 132 ntBASIC0.49□□□□□ -2.33
CDK7P50613 RNU6-571P-201ENST00000384128 107 ntBASIC0.49□□□□□ -2.33
CDK7P50613 Y_RNA.549-201ENST00000384657 102 ntBASIC0.49□□□□□ -2.33
CDK7P50613 MIR518A1-201ENST00000385068 85 ntBASIC0.49□□□□□ -2.33
CDK7P50613 RNU7-104P-201ENST00000459398 79 ntBASIC0.49□□□□□ -2.33
CDK7P50613 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
CDK7P50613 AC096720.1-201ENST00000604441 183 ntBASIC0.49□□□□□ -2.33
CDK7P50613 AL365222.1-201ENST00000614661 98 ntBASIC0.49□□□□□ -2.33
CDK7P50613 AL035470.1-201ENST00000622571 220 ntBASIC0.49□□□□□ -2.33
CDK7P50613 AC132825.6-201ENST00000638861 357 ntBASIC0.49□□□□□ -2.33
CDK7P50613 AC091304.10-201ENST00000641554 121 ntBASIC0.49□□□□□ -2.33
CDK7P50613 RNU6-1313P-201ENST00000362622 102 ntBASIC0.48□□□□□ -2.33
CDK7P50613 RNU6-1117P-201ENST00000384525 104 ntBASIC0.48□□□□□ -2.33
CDK7P50613 RNU7-195P-201ENST00000458793 62 ntBASIC0.48□□□□□ -2.33
CDK7P50613 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
CDK7P50613 Y_RNA.809-201ENST00000516058 95 ntBASIC0.48□□□□□ -2.33
CDK7P50613 RNA5SP47-201ENST00000517230 109 ntBASIC0.48□□□□□ -2.33
CDK7P50613 SNORD38.1-201ENST00000363863 68 ntBASIC0.47□□□□□ -2.33
CDK7P50613 Y_RNA.342-201ENST00000365352 113 ntBASIC0.47□□□□□ -2.33
CDK7P50613 RNU6-81P-201ENST00000365608 104 ntBASIC0.47□□□□□ -2.33
CDK7P50613 SNORD116-21-201ENST00000384507 92 ntBASIC0.47□□□□□ -2.33
CDK7P50613 MIR548G-201ENST00000408442 89 ntBASIC0.47□□□□□ -2.33
CDK7P50613 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.47□□□□□ -2.33
CDK7P50613 RNU6-1018P-201ENST00000516577 106 ntBASIC0.47□□□□□ -2.33
CDK7P50613 MIR3910-1-201ENST00000580936 111 ntBASIC0.47□□□□□ -2.33
CDK7P50613 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.47□□□□□ -2.33
CDK7P50613 AC244505.6-201ENST00000452829 130 ntBASIC0.46□□□□□ -2.34
CDK7P50613 AC068339.1-201ENST00000526965 141 ntBASIC0.46□□□□□ -2.34
CDK7P50613 MIR4679-2-201ENST00000578358 77 ntBASIC0.46□□□□□ -2.34
CDK7P50613 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
CDK7P50613 AL442128.1-201ENST00000615151 90 ntBASIC0.46□□□□□ -2.34
CDK7P50613 Y_RNA.57-201ENST00000362806 113 ntBASIC0.45□□□□□ -2.34
CDK7P50613 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CDK7P50613 MIR516A2-201ENST00000384888 90 ntBASIC0.45□□□□□ -2.34
CDK7P50613 MIR516A1-201ENST00000385033 90 ntBASIC0.45□□□□□ -2.34
CDK7P50613 SNRPGP12-201ENST00000449481 213 ntBASIC0.45□□□□□ -2.34
CDK7P50613 AC067863.3-201ENST00000624172 122 ntBASIC0.45□□□□□ -2.34
CDK7P50613 Y_RNA.247-201ENST00000364500 92 ntBASIC0.44□□□□□ -2.34
CDK7P50613 RNU6-1201P-201ENST00000384227 107 ntBASIC0.44□□□□□ -2.34
CDK7P50613 AC097635.1-201ENST00000450678 155 ntBASIC0.44□□□□□ -2.34
CDK7P50613 Y_RNA.659-201ENST00000515994 113 ntBASIC0.44□□□□□ -2.34
CDK7P50613 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
CDK7P50613 RNU6-1099P-201ENST00000363533 107 ntBASIC0.43□□□□□ -2.34
CDK7P50613 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CDK7P50613 RNU6-880P-201ENST00000384526 107 ntBASIC0.43□□□□□ -2.34
CDK7P50613 RNU6-1154P-201ENST00000391001 104 ntBASIC0.43□□□□□ -2.34
CDK7P50613 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
CDK7P50613 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
CDK7P50613 RNU7-106P-201ENST00000459514 67 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms