Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-214P-201ENST00000384130 107 ntBASIC-1.8□□□□□ -2.7
HTTP42858 MIR548A1-201ENST00000385041 97 ntBASIC-1.8□□□□□ -2.7
HTTP42858 AL512310.12-203ENST00000640543 90 ntBASIC-1.8□□□□□ -2.7
HTTP42858 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-645P-201ENST00000364649 106 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-157P-201ENST00000383957 107 ntBASIC-1.8□□□□□ -2.7
HTTP42858 SNORD78.2-201ENST00000391076 69 ntBASIC-1.8□□□□□ -2.7
HTTP42858 MIR3942-201ENST00000585264 109 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU2-4P-201ENST00000606190 192 ntBASIC-1.8□□□□□ -2.7
HTTP42858 AL138825.1-201ENST00000618587 192 ntBASIC-1.8□□□□□ -2.7
HTTP42858 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-82P-201ENST00000363970 107 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-800P-201ENST00000384473 103 ntBASIC-1.8□□□□□ -2.7
HTTP42858 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.8□□□□□ -2.7
HTTP42858 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.8□□□□□ -2.7
HTTP42858 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.8□□□□□ -2.7
HTTP42858 RNU6-883P-201ENST00000384597 107 ntBASIC-1.81□□□□□ -2.7
HTTP42858 RPS29P25-201ENST00000481709 171 ntBASIC-1.81□□□□□ -2.7
HTTP42858 MIR3140-201ENST00000583685 90 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.81□□□□□ -2.7
HTTP42858 RNU6-792P-201ENST00000363490 107 ntBASIC-1.81□□□□□ -2.7
HTTP42858 RNU4-68P-201ENST00000364314 141 ntBASIC-1.81□□□□□ -2.7
HTTP42858 MIR509-1-201ENST00000385265 94 ntBASIC-1.81□□□□□ -2.7
HTTP42858 MIR509-2-201ENST00000390724 91 ntBASIC-1.81□□□□□ -2.7
HTTP42858 RNU6-189P-201ENST00000516120 101 ntBASIC-1.81□□□□□ -2.7
HTTP42858 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.81□□□□□ -2.7
HTTP42858 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.81□□□□□ -2.7
HTTP42858 AC009161.2-201ENST00000624626 138 ntBASIC-1.81□□□□□ -2.7
HTTP42858 SNORD18C-201ENST00000362704 69 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-957P-201ENST00000363652 99 ntBASIC-1.82□□□□□ -2.7
HTTP42858 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.82□□□□□ -2.7
HTTP42858 VN1R91P-201ENST00000594377 169 ntBASIC-1.82□□□□□ -2.7
HTTP42858 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.82□□□□□ -2.7
HTTP42858 AC025521.1-201ENST00000621624 286 ntBASIC-1.82□□□□□ -2.7
HTTP42858 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-501P-201ENST00000364072 100 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNY1P1-201ENST00000364372 112 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-453P-201ENST00000516819 85 ntBASIC-1.82□□□□□ -2.7
HTTP42858 AP002963.1-201ENST00000530590 184 ntBASIC-1.82□□□□□ -2.7
HTTP42858 AL731768.1-201ENST00000603124 139 ntBASIC-1.82□□□□□ -2.7
HTTP42858 AL132765.2-201ENST00000610812 351 ntBASIC-1.82□□□□□ -2.7
HTTP42858 TPTEP1-208ENST00000636884 213 ntBASIC-1.82□□□□□ -2.7
HTTP42858 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.82□□□□□ -2.7
HTTP42858 MIR548G-201ENST00000408442 89 ntBASIC-1.82□□□□□ -2.7
HTTP42858 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.82□□□□□ -2.7
HTTP42858 RNU6-888P-201ENST00000363010 101 ntBASIC-1.83□□□□□ -2.7
HTTP42858 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.83□□□□□ -2.7
HTTP42858 RNA5SP401-201ENST00000515920 127 ntBASIC-1.83□□□□□ -2.7
HTTP42858 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.83□□□□□ -2.7
HTTP42858 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.83□□□□□ -2.7
HTTP42858 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.83□□□□□ -2.7
HTTP42858 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.83□□□□□ -2.7
HTTP42858 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.84□□□□□ -2.7
HTTP42858 SNORD63-201ENST00000384262 68 ntBASIC-1.84□□□□□ -2.7
HTTP42858 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.84□□□□□ -2.7
HTTP42858 MIR548A3-201ENST00000385297 97 ntBASIC-1.84□□□□□ -2.7
HTTP42858 AC083798.1-201ENST00000472671 131 ntBASIC-1.84□□□□□ -2.7
HTTP42858 AC083904.1-201ENST00000487828 231 ntBASIC-1.84□□□□□ -2.7
HTTP42858 MIR34C-201ENST00000384831 77 ntBASIC-1.84□□□□□ -2.7
HTTP42858 SNORD37.1-201ENST00000390968 65 ntBASIC-1.84□□□□□ -2.7
HTTP42858 RNU6-656P-201ENST00000516785 107 ntBASIC-1.84□□□□□ -2.7
HTTP42858 SNORD115-37-201ENST00000363768 82 ntBASIC-1.84□□□□□ -2.7
HTTP42858 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.84□□□□□ -2.7
HTTP42858 RNU6-995P-201ENST00000391244 107 ntBASIC-1.84□□□□□ -2.7
HTTP42858 AC024067.1-201ENST00000426199 223 ntBASIC-1.84□□□□□ -2.7
HTTP42858 AL118496.2-201ENST00000448300 230 ntBASIC-1.84□□□□□ -2.7
HTTP42858 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.84□□□□□ -2.7
HTTP42858 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.85□□□□□ -2.71
HTTP42858 SNORD60-201ENST00000383903 83 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.85□□□□□ -2.71
HTTP42858 AL691482.2-201ENST00000457453 84 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-345P-201ENST00000517001 107 ntBASIC-1.85□□□□□ -2.71
HTTP42858 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-254P-201ENST00000363377 107 ntBASIC-1.85□□□□□ -2.71
HTTP42858 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.85□□□□□ -2.71
HTTP42858 MIR624-201ENST00000385217 97 ntBASIC-1.85□□□□□ -2.71
HTTP42858 AC016550.1-201ENST00000505348 785 ntBASIC-1.85□□□□□ -2.71
HTTP42858 MRPS35P2-201ENST00000508242 191 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-311P-201ENST00000516224 102 ntBASIC-1.85□□□□□ -2.71
HTTP42858 RNU6-445P-201ENST00000516949 107 ntBASIC-1.85□□□□□ -2.71
HTTP42858 AC006006.1-201ENST00000603082 144 ntBASIC-1.85□□□□□ -2.71
HTTP42858 SNORD81.1-201ENST00000363064 77 ntBASIC-1.86□□□□□ -2.71
HTTP42858 SNORA79-201ENST00000408376 140 ntBASIC-1.86□□□□□ -2.71
HTTP42858 SNORD4B-201ENST00000459083 72 ntBASIC-1.86□□□□□ -2.71
HTTP42858 AC093424.1-201ENST00000604999 338 ntBASIC-1.86□□□□□ -2.71
HTTP42858 SNORA27.2-201ENST00000363365 126 ntBASIC-1.86□□□□□ -2.71
HTTP42858 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.86□□□□□ -2.71
HTTP42858 RNU4-69P-201ENST00000410677 143 ntBASIC-1.86□□□□□ -2.71
HTTP42858 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.86□□□□□ -2.71
HTTP42858 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms