Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC132825.6-201ENST00000638861 357 ntBASIC0.4□□□□□ -2.35
SOX3P41225 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.4□□□□□ -2.35
SOX3P41225 RNU6-1168P-201ENST00000390831 104 ntBASIC0.39□□□□□ -2.35
SOX3P41225 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
SOX3P41225 AC244505.6-201ENST00000452829 130 ntBASIC0.39□□□□□ -2.35
SOX3P41225 RNA5SP47-201ENST00000517230 109 ntBASIC0.39□□□□□ -2.35
SOX3P41225 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
SOX3P41225 RN7SL793P-201ENST00000583259 296 ntBASIC0.39□□□□□ -2.35
SOX3P41225 Y_RNA.35-201ENST00000362601 101 ntBASIC0.38□□□□□ -2.35
SOX3P41225 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
SOX3P41225 Y_RNA.155-201ENST00000363632 101 ntBASIC0.38□□□□□ -2.35
SOX3P41225 RNA5SP205-201ENST00000364653 136 ntBASIC0.38□□□□□ -2.35
SOX3P41225 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
SOX3P41225 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
SOX3P41225 MIR548A3-201ENST00000385297 97 ntBASIC0.38□□□□□ -2.35
SOX3P41225 RPL39P34-201ENST00000477141 156 ntBASIC0.38□□□□□ -2.35
SOX3P41225 RNU6-850P-201ENST00000516934 103 ntBASIC0.38□□□□□ -2.35
SOX3P41225 AL670379.3-201ENST00000605040 251 ntBASIC0.38□□□□□ -2.35
SOX3P41225 MIR7107-201ENST00000611489 80 ntBASIC0.38□□□□□ -2.35
SOX3P41225 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
SOX3P41225 AC244669.1-204ENST00000621564 178 ntBASIC0.38□□□□□ -2.35
SOX3P41225 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.38□□□□□ -2.35
SOX3P41225 MIR6828-201ENST00000636181 60 ntBASIC0.38□□□□□ -2.35
SOX3P41225 U6.95-201ENST00000636931 70 ntBASIC0.38□□□□□ -2.35
SOX3P41225 Y_RNA.49-201ENST00000362714 112 ntBASIC0.37□□□□□ -2.35
SOX3P41225 U8.6-201ENST00000364939 135 ntBASIC0.37□□□□□ -2.35
SOX3P41225 RNU6-409P-201ENST00000384114 104 ntBASIC0.37□□□□□ -2.35
SOX3P41225 MIR516A2-201ENST00000384888 90 ntBASIC0.37□□□□□ -2.35
SOX3P41225 MIR516A1-201ENST00000385033 90 ntBASIC0.37□□□□□ -2.35
SOX3P41225 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.37□□□□□ -2.35
SOX3P41225 SNORD63B-201ENST00000411005 70 ntBASIC0.37□□□□□ -2.35
SOX3P41225 AC008267.6-201ENST00000441664 139 ntBASIC0.37□□□□□ -2.35
SOX3P41225 RNU7-195P-201ENST00000458793 62 ntBASIC0.37□□□□□ -2.35
SOX3P41225 RNU6-1018P-201ENST00000516577 106 ntBASIC0.37□□□□□ -2.35
SOX3P41225 AC068339.1-201ENST00000526965 141 ntBASIC0.37□□□□□ -2.35
SOX3P41225 MIR548H5-201ENST00000580314 60 ntBASIC0.37□□□□□ -2.35
SOX3P41225 MIR4639-201ENST00000584938 69 ntBASIC0.37□□□□□ -2.35
SOX3P41225 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
SOX3P41225 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
SOX3P41225 Y_RNA.281-201ENST00000364774 94 ntBASIC0.36□□□□□ -2.35
SOX3P41225 RNY1P4-201ENST00000384595 115 ntBASIC0.36□□□□□ -2.35
SOX3P41225 MIR7-2-201ENST00000384970 110 ntBASIC0.36□□□□□ -2.35
SOX3P41225 RNU6-406P-201ENST00000516470 107 ntBASIC0.36□□□□□ -2.35
SOX3P41225 MIR6129-201ENST00000616087 109 ntBASIC0.36□□□□□ -2.35
SOX3P41225 AC091304.10-201ENST00000641554 121 ntBASIC0.36□□□□□ -2.35
SOX3P41225 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
SOX3P41225 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
SOX3P41225 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
SOX3P41225 SNORD115-24-201ENST00000363528 82 ntBASIC0.35□□□□□ -2.35
SOX3P41225 Y_RNA.173-201ENST00000363776 113 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU6-1229P-201ENST00000364295 107 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU6-1163P-201ENST00000364516 107 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU6-571P-201ENST00000384128 107 ntBASIC0.35□□□□□ -2.35
SOX3P41225 Y_RNA.507-201ENST00000384500 99 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU6-1117P-201ENST00000384525 104 ntBASIC0.35□□□□□ -2.35
SOX3P41225 MIR635-201ENST00000384830 98 ntBASIC0.35□□□□□ -2.35
SOX3P41225 SNORA19.1-201ENST00000410656 129 ntBASIC0.35□□□□□ -2.35
SOX3P41225 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
SOX3P41225 AL606753.1-201ENST00000427435 87 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
SOX3P41225 SCARNA16.5-201ENST00000517114 183 ntBASIC0.35□□□□□ -2.35
SOX3P41225 AC138869.1-201ENST00000568623 124 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU7-10P-201ENST00000607194 63 ntBASIC0.35□□□□□ -2.35
SOX3P41225 AL442128.1-201ENST00000615151 90 ntBASIC0.35□□□□□ -2.35
SOX3P41225 AC010487.4-201ENST00000637027 61 ntBASIC0.35□□□□□ -2.35
SOX3P41225 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.36
SOX3P41225 RNA5SP403-201ENST00000363598 108 ntBASIC0.34□□□□□ -2.36
SOX3P41225 Y_RNA.221-201ENST00000364248 96 ntBASIC0.34□□□□□ -2.36
SOX3P41225 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
SOX3P41225 RNU6-1144P-201ENST00000384247 104 ntBASIC0.34□□□□□ -2.36
SOX3P41225 SNORD116-21-201ENST00000384507 92 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR599-201ENST00000385069 95 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR548G-201ENST00000408442 89 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR1912-201ENST00000410389 80 ntBASIC0.34□□□□□ -2.36
SOX3P41225 RNU4-61P-201ENST00000411243 107 ntBASIC0.34□□□□□ -2.36
SOX3P41225 AC069271.1-201ENST00000445577 156 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR5009-201ENST00000578736 100 ntBASIC0.34□□□□□ -2.36
SOX3P41225 MIR548Z-201ENST00000584743 97 ntBASIC0.34□□□□□ -2.36
SOX3P41225 RNU1-29P-201ENST00000606574 126 ntBASIC0.34□□□□□ -2.36
SOX3P41225 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.34□□□□□ -2.36
SOX3P41225 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-170P-201ENST00000362832 104 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-832P-201ENST00000363319 107 ntBASIC0.33□□□□□ -2.36
SOX3P41225 SNORD38.1-201ENST00000363863 68 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
SOX3P41225 Y_RNA.309-201ENST00000365046 111 ntBASIC0.33□□□□□ -2.36
SOX3P41225 Y_RNA.323-201ENST00000365157 109 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-476P-201ENST00000384726 107 ntBASIC0.33□□□□□ -2.36
SOX3P41225 SNORA19-201ENST00000384737 128 ntBASIC0.33□□□□□ -2.36
SOX3P41225 MIR519A1-201ENST00000385257 85 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-1154P-201ENST00000391001 104 ntBASIC0.33□□□□□ -2.36
SOX3P41225 AL161932.1-201ENST00000437408 146 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
SOX3P41225 RNU6-479P-201ENST00000516348 105 ntBASIC0.33□□□□□ -2.36
SOX3P41225 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
SOX3P41225 SNORD36A-201ENST00000362874 73 ntBASIC0.32□□□□□ -2.36
SOX3P41225 RNU6-1107P-201ENST00000364817 104 ntBASIC0.32□□□□□ -2.36
SOX3P41225 Y_RNA.342-201ENST00000365352 113 ntBASIC0.32□□□□□ -2.36
SOX3P41225 RNU6-716P-201ENST00000365621 103 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms