Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 BX276092.1-201ENST00000427368 251 ntBASIC0.77□□□□□ -2.29
TIMP3P35625 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.77□□□□□ -2.29
TIMP3P35625 RNU6-795P-201ENST00000516323 103 ntBASIC0.77□□□□□ -2.29
TIMP3P35625 Y_RNA.697-201ENST00000516776 113 ntBASIC0.77□□□□□ -2.29
TIMP3P35625 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
TIMP3P35625 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
TIMP3P35625 RNU6-170P-201ENST00000362832 104 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 Y_RNA.95-201ENST00000363079 95 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 RNU6-571P-201ENST00000384128 107 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 Y_RNA.466-201ENST00000384294 113 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 Y_RNA.567-201ENST00000384736 106 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 AC109327.2-201ENST00000448339 378 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 MIR4439-201ENST00000583746 80 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 AC012531.4-201ENST00000616509 177 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 MIR6515-201ENST00000619843 57 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 AC091304.10-201ENST00000641554 121 ntBASIC0.76□□□□□ -2.29
TIMP3P35625 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
TIMP3P35625 Y_RNA.93-201ENST00000363066 109 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 Y_RNA.107-201ENST00000363190 121 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 Y_RNA.173-201ENST00000363776 113 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 RNU6-1163P-201ENST00000364516 107 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TIMP3P35625 SNORD100-201ENST00000408573 76 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 SNRPGP12-201ENST00000449481 213 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 RNU6-850P-201ENST00000516934 103 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 RNU6-448P-201ENST00000517052 107 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 MIR548H5-201ENST00000580314 60 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 RNU6-86P-201ENST00000606534 107 ntBASIC0.75□□□□□ -2.29
TIMP3P35625 Y_RNA.56-201ENST00000362798 112 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 Y_RNA.536-201ENST00000384621 113 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 RNU6-535P-201ENST00000384722 107 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 MIR635-201ENST00000384830 98 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 RNU6-168P-201ENST00000516189 101 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 AP003327.1-201ENST00000529684 127 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 MIR548Z-201ENST00000584743 97 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 RNU7-10P-201ENST00000607194 63 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 AP001318.4-201ENST00000616637 121 ntBASIC0.74□□□□□ -2.29
TIMP3P35625 RNU6-813P-201ENST00000384691 107 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 RNA5SP89-201ENST00000410300 108 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 SNORA40.13-201ENST00000516379 120 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 Y_RNA.677-201ENST00000516401 85 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 MIR4777-201ENST00000583710 86 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.73□□□□□ -2.29
TIMP3P35625 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.73□□□□□ -2.29
TIMP3P35625 Y_RNA.96-201ENST00000363092 109 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 RNU6-1125P-201ENST00000363601 107 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 Y_RNA.342-201ENST00000365352 113 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 Y_RNA.467-201ENST00000384297 102 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 RNU6-480P-201ENST00000384332 107 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 RNU6-291P-201ENST00000384720 107 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 SNORD99-201ENST00000408612 74 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 MTATP8P2-201ENST00000435212 202 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 RNU6-158P-201ENST00000517104 100 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 MIR2052-201ENST00000636055 55 ntBASIC0.72□□□□□ -2.29
TIMP3P35625 Y_RNA.57-201ENST00000362806 113 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 RNU6-1244P-201ENST00000363614 108 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 RNU6-644P-201ENST00000391155 98 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 AC002350.1-201ENST00000490759 375 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 RNU7-61P-201ENST00000515897 61 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 ACA64.5-201ENST00000516207 127 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
TIMP3P35625 Y_RNA.348-201ENST00000365403 103 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TIMP3P35625 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 MIR181B2-201ENST00000385004 89 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 SNORD63B-201ENST00000411005 70 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 TRAJ51-201ENST00000504127 63 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 Y_RNA.705-201ENST00000516862 110 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.7□□□□□ -2.3
TIMP3P35625 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 AC138869.1-201ENST00000568623 124 ntBASIC0.7□□□□□ -2.3
TIMP3P35625 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TIMP3P35625 Y_RNA.174-201ENST00000363781 105 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 RNA5SP245-201ENST00000364239 121 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 MIR598-201ENST00000384868 97 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 MIR516A2-201ENST00000384888 90 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 MIR516A1-201ENST00000385033 90 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 RNU6-972P-201ENST00000391208 107 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 SNORA31.14-201ENST00000516728 116 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 AC011195.1-201ENST00000578177 177 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 AC103810.7-201ENST00000607821 91 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 uc_338.16-201ENST00000621804 95 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
TIMP3P35625 RNU6-905P-201ENST00000384434 107 ntBASIC0.68□□□□□ -2.3
TIMP3P35625 Y_RNA.540-201ENST00000384638 111 ntBASIC0.68□□□□□ -2.3
TIMP3P35625 RNU6-1254P-201ENST00000391266 104 ntBASIC0.68□□□□□ -2.3
TIMP3P35625 RNU6-887P-201ENST00000410660 100 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms