Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SNORA19.1-201ENST00000410656 129 ntBASIC1.06□□□□□ -2.24
SLC6A4P31645 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC6A4P31645 Y_RNA.56-201ENST00000362798 112 ntBASIC1.05□□□□□ -2.24
SLC6A4P31645 Y_RNA.173-201ENST00000363776 113 ntBASIC1.05□□□□□ -2.24
SLC6A4P31645 Y_RNA.247-201ENST00000364500 92 ntBASIC1.05□□□□□ -2.24
SLC6A4P31645 Y_RNA.567-201ENST00000384736 106 ntBASIC1.05□□□□□ -2.24
SLC6A4P31645 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
SLC6A4P31645 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
SLC6A4P31645 RNU6-170P-201ENST00000362832 104 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 RNU6-168P-201ENST00000516189 101 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 SNORA40.13-201ENST00000516379 120 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 Y_RNA.697-201ENST00000516776 113 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 RNU6-448P-201ENST00000517052 107 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 AC013244.2-201ENST00000603396 103 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 AP001318.4-201ENST00000616637 121 ntBASIC1.04□□□□□ -2.24
SLC6A4P31645 RNU6-1125P-201ENST00000363601 107 ntBASIC1.03□□□□□ -2.24
SLC6A4P31645 RNU6-480P-201ENST00000384332 107 ntBASIC1.03□□□□□ -2.24
SLC6A4P31645 MIR520H-201ENST00000385126 88 ntBASIC1.03□□□□□ -2.24
SLC6A4P31645 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
SLC6A4P31645 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
SLC6A4P31645 Y_RNA.174-201ENST00000363781 105 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 RNU6-1163P-201ENST00000364516 107 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 Y_RNA.536-201ENST00000384621 113 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 SNORD100-201ENST00000408573 76 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 BX276092.1-201ENST00000427368 251 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SLC6A4P31645 Y_RNA.677-201ENST00000516401 85 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 Y_RNA.705-201ENST00000516862 110 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 RNU6-850P-201ENST00000516934 103 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
SLC6A4P31645 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
SLC6A4P31645 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.02□□□□□ -2.25
SLC6A4P31645 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SLC6A4P31645 Y_RNA.205-201ENST00000364128 113 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 Y_RNA.342-201ENST00000365352 113 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 MIR635-201ENST00000384830 98 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 RNU6-972P-201ENST00000391208 107 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 AC109327.2-201ENST00000448339 378 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 AC012531.4-201ENST00000616509 177 ntBASIC1.01□□□□□ -2.25
SLC6A4P31645 RNU6-1244P-201ENST00000363614 108 ntBASIC1□□□□□ -2.25
SLC6A4P31645 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1□□□□□ -2.25
SLC6A4P31645 RNU6-535P-201ENST00000384722 107 ntBASIC1□□□□□ -2.25
SLC6A4P31645 MTATP8P2-201ENST00000435212 202 ntBASIC1□□□□□ -2.25
SLC6A4P31645 RNU6-795P-201ENST00000516323 103 ntBASIC1□□□□□ -2.25
SLC6A4P31645 RNU6-109P-201ENST00000516364 107 ntBASIC1□□□□□ -2.25
SLC6A4P31645 RNU6-184P-201ENST00000516514 107 ntBASIC1□□□□□ -2.25
SLC6A4P31645 MIR4777-201ENST00000583710 86 ntBASIC1□□□□□ -2.25
SLC6A4P31645 MIR373-201ENST00000362273 69 ntBASIC0.99□□□□□ -2.25
SLC6A4P31645 MIR519A1-201ENST00000385257 85 ntBASIC0.99□□□□□ -2.25
SLC6A4P31645 AC138907.6-201ENST00000568401 126 ntBASIC0.99□□□□□ -2.25
SLC6A4P31645 AC138869.1-201ENST00000568623 124 ntBASIC0.99□□□□□ -2.25
SLC6A4P31645 AC091304.10-201ENST00000641554 121 ntBASIC0.99□□□□□ -2.25
SLC6A4P31645 Y_RNA.57-201ENST00000362806 113 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 Y_RNA.348-201ENST00000365403 103 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RNU6-291P-201ENST00000384720 107 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RNA5SP89-201ENST00000410300 108 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 Y_RNA.694-201ENST00000516677 117 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RNU6-135P-201ENST00000516769 101 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RNU6-86P-201ENST00000606534 107 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
SLC6A4P31645 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
SLC6A4P31645 RNU4-45P-201ENST00000365469 141 ntBASIC0.97□□□□□ -2.25
SLC6A4P31645 RNU6-887P-201ENST00000410660 100 ntBASIC0.97□□□□□ -2.25
SLC6A4P31645 AC002350.1-201ENST00000490759 375 ntBASIC0.97□□□□□ -2.25
SLC6A4P31645 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
SLC6A4P31645 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SLC6A4P31645 Y_RNA.467-201ENST00000384297 102 ntBASIC0.96□□□□□ -2.26
SLC6A4P31645 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SLC6A4P31645 SNORD63B-201ENST00000411005 70 ntBASIC0.96□□□□□ -2.26
SLC6A4P31645 AC092628.1-201ENST00000436250 252 ntBASIC0.96□□□□□ -2.26
SLC6A4P31645 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
SLC6A4P31645 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SLC6A4P31645 MIR216A-201ENST00000385063 110 ntBASIC0.95□□□□□ -2.26
SLC6A4P31645 RNU6-1254P-201ENST00000391266 104 ntBASIC0.95□□□□□ -2.26
SLC6A4P31645 AC097635.1-201ENST00000450678 155 ntBASIC0.95□□□□□ -2.26
SLC6A4P31645 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.95□□□□□ -2.26
SLC6A4P31645 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
SLC6A4P31645 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.95□□□□□ -2.26
SLC6A4P31645 RNU6-1335P-201ENST00000365426 107 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 RNU6-644P-201ENST00000391155 98 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 RNU7-61P-201ENST00000515897 61 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 RNU6-469P-201ENST00000516253 101 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 uc_338.16-201ENST00000621804 95 ntBASIC0.94□□□□□ -2.26
SLC6A4P31645 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
SLC6A4P31645 SNORD116-10-201ENST00000363791 102 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 RNU6-905P-201ENST00000384434 107 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 MIR181B2-201ENST00000385004 89 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 RNU6-243P-201ENST00000391140 107 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 AC244505.6-201ENST00000452829 130 ntBASIC0.93□□□□□ -2.26
SLC6A4P31645 TRAJ51-201ENST00000504127 63 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms