Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HOXC8P31273 Y_RNA.536-201ENST00000384621 113 ntBASIC0.65□□□□□ -2.31
HOXC8P31273 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
HOXC8P31273 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.65□□□□□ -2.31
HOXC8P31273 AC002350.1-201ENST00000490759 375 ntBASIC0.65□□□□□ -2.31
HOXC8P31273 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
HOXC8P31273 Y_RNA.32-201ENST00000362589 110 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNU6-1325P-201ENST00000364905 105 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNA5SP117-201ENST00000365294 118 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNU6-1014P-201ENST00000383940 103 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNU6-1201P-201ENST00000384227 107 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 MIR577-201ENST00000385196 96 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.64□□□□□ -2.31
HOXC8P31273 RNU6-589P-201ENST00000516485 107 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNU6-1018P-201ENST00000516577 106 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.64□□□□□ -2.31
HOXC8P31273 RNA5SP325-201ENST00000363756 130 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 SPINT5P-201ENST00000448174 155 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 RNU6-1006P-201ENST00000516998 103 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 MTND5P40-201ENST00000559945 246 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 AL442128.1-201ENST00000615151 90 ntBASIC0.63□□□□□ -2.31
HOXC8P31273 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 RNA5SP245-201ENST00000364239 121 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 Y_RNA.323-201ENST00000365157 109 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 MIR644A-201ENST00000385262 94 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 Y_RNA.709-201ENST00000516952 92 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 MIR4694-201ENST00000578534 80 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 uc_338.16-201ENST00000621804 95 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.62□□□□□ -2.31
HOXC8P31273 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
HOXC8P31273 Y_RNA.56-201ENST00000362798 112 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 RNY3P2-201ENST00000362918 102 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 RNU6-832P-201ENST00000363319 107 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 SNORD38.1-201ENST00000363863 68 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 SNORD20-201ENST00000384550 80 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 MIR3613-201ENST00000579844 87 ntBASIC0.61□□□□□ -2.31
HOXC8P31273 RNU6-1099P-201ENST00000363533 107 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 MIR548G-201ENST00000408442 89 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 SNORA19.1-201ENST00000410656 129 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 RNU6-850P-201ENST00000516934 103 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 AC141557.1-201ENST00000540982 400 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 MIR548H5-201ENST00000580314 60 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 RNU6-90P-201ENST00000606352 106 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 uc_338.28-201ENST00000612082 187 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
HOXC8P31273 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
HOXC8P31273 Y_RNA.163-201ENST00000363702 113 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 Y_RNA.174-201ENST00000363781 105 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 Y_RNA.377-201ENST00000365644 108 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 RNU6-571P-201ENST00000384128 107 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 RNY4P18-201ENST00000391107 89 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 SNRPGP12-201ENST00000449481 213 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 TRAJ51-201ENST00000504127 63 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 Y_RNA.659-201ENST00000515994 113 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 RNU6-469P-201ENST00000516253 101 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXC8P31273 MIR3678-201ENST00000578455 94 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 AC096720.1-201ENST00000604441 183 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
HOXC8P31273 RNU6-215P-201ENST00000365169 102 ntBASIC0.58□□□□□ -2.32
HOXC8P31273 MIR193B-201ENST00000384907 83 ntBASIC0.58□□□□□ -2.32
HOXC8P31273 RNU6-554P-201ENST00000410466 106 ntBASIC0.58□□□□□ -2.32
HOXC8P31273 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
HOXC8P31273 RNU6-170P-201ENST00000362832 104 ntBASIC0.57□□□□□ -2.32
HOXC8P31273 RNU6-106P-201ENST00000384405 107 ntBASIC0.57□□□□□ -2.32
HOXC8P31273 MIR1302-5-201ENST00000408164 150 ntBASIC0.57□□□□□ -2.32
HOXC8P31273 SNORD63B-201ENST00000411005 70 ntBASIC0.57□□□□□ -2.32
HOXC8P31273 RNU7-10P-201ENST00000607194 63 ntBASIC0.57□□□□□ -2.32
HOXC8P31273 SNORA63.4-201ENST00000362763 126 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 RNU4-36P-201ENST00000364294 144 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 Y_RNA.342-201ENST00000365352 113 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 RNU4-45P-201ENST00000365469 141 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 AC109327.2-201ENST00000448339 378 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.56□□□□□ -2.32
HOXC8P31273 RNU6-919P-201ENST00000516731 104 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 AC138869.1-201ENST00000568623 124 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 MIR1273G-201ENST00000577677 100 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 AC091304.10-201ENST00000641554 121 ntBASIC0.56□□□□□ -2.32
HOXC8P31273 Y_RNA.57-201ENST00000362806 113 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 SNORD18A-201ENST00000363753 72 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 Y_RNA.173-201ENST00000363776 113 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 RNU6-1163P-201ENST00000364516 107 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 Y_RNA.567-201ENST00000384736 106 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 MIR516A2-201ENST00000384888 90 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 MIR516A1-201ENST00000385033 90 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 RNU7-195P-201ENST00000458793 62 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 RNU7-106P-201ENST00000459514 67 ntBASIC0.55□□□□□ -2.32
HOXC8P31273 RNU6-756P-201ENST00000383997 107 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms