Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
CNGA1P29973 SNRPGP12-201ENST00000449481 213 ntBASIC0.78□□□□□ -2.28
CNGA1P29973 RNA5SP457-201ENST00000363657 124 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 RNU6-880P-201ENST00000384526 107 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 AC244505.6-201ENST00000452829 130 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 AC018659.1-201ENST00000551083 169 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 AC138869.1-201ENST00000568623 124 ntBASIC0.77□□□□□ -2.29
CNGA1P29973 RNU6-1201P-201ENST00000384227 107 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 RNU6-1154P-201ENST00000391001 104 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 RNU6-313P-201ENST00000516317 112 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 RNA5SP330-201ENST00000517096 96 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 AC068339.1-201ENST00000526965 141 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 MIR4711-201ENST00000578274 70 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.76□□□□□ -2.29
CNGA1P29973 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CNGA1P29973 SNORD38.1-201ENST00000363863 68 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 Y_RNA.281-201ENST00000364774 94 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 SNORD116-21-201ENST00000384507 92 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 Y_RNA.567-201ENST00000384736 106 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 MIR635-201ENST00000384830 98 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 TRAJ51-201ENST00000504127 63 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 MIR4639-201ENST00000584938 69 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 AC243829.3-201ENST00000622177 108 ntBASIC0.75□□□□□ -2.29
CNGA1P29973 U8.6-201ENST00000364939 135 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 Y_RNA.377-201ENST00000365644 108 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 RNU6-1144P-201ENST00000384247 104 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 RNU6-476P-201ENST00000384726 107 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 RNU2-51P-201ENST00000410708 197 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 AL442128.1-201ENST00000615151 90 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 AC092634.7-201ENST00000621022 103 ntBASIC0.74□□□□□ -2.29
CNGA1P29973 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.74□□□□□ -2.29
CNGA1P29973 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CNGA1P29973 RNU6-834P-201ENST00000362367 110 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNU6-170P-201ENST00000362832 104 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 SNORA36.1-201ENST00000363424 132 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 Y_RNA.247-201ENST00000364500 92 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 Y_RNA.258-201ENST00000364613 105 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNA5SP517-201ENST00000364724 117 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 SNORD28-201ENST00000384706 75 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 MIR519A1-201ENST00000385257 85 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RN7SKP12-201ENST00000516275 143 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNU4-54P-201ENST00000516428 129 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNU6-850P-201ENST00000516934 103 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 RNA5SP47-201ENST00000517230 109 ntBASIC0.73□□□□□ -2.29
CNGA1P29973 Y_RNA.35-201ENST00000362601 101 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 Y_RNA.49-201ENST00000362714 112 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 RNU6-1229P-201ENST00000364295 107 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 RNU6-1064P-201ENST00000410626 104 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 MIR4694-201ENST00000578534 80 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
CNGA1P29973 MIR577-201ENST00000385196 96 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 SNORD63B-201ENST00000411005 70 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 AL606753.1-201ENST00000427435 87 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 AC097635.1-201ENST00000450678 155 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 SCARNA16.5-201ENST00000517114 183 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 MTND5P40-201ENST00000559945 246 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 MIR5009-201ENST00000578736 100 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.71□□□□□ -2.3
CNGA1P29973 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 MIR6828-201ENST00000636181 60 ntBASIC0.71□□□□□ -2.3
CNGA1P29973 Y_RNA.323-201ENST00000365157 109 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 RNU6-716P-201ENST00000365621 103 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 SNORA8.2-201ENST00000384372 139 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 MIR548G-201ENST00000408442 89 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 RNU6-412P-201ENST00000516434 106 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 AL109933.3-201ENST00000619095 188 ntBASIC0.7□□□□□ -2.3
CNGA1P29973 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CNGA1P29973 Y_RNA.342-201ENST00000365352 113 ntBASIC0.69□□□□□ -2.3
CNGA1P29973 SNORA40.8-201ENST00000411034 126 ntBASIC0.69□□□□□ -2.3
CNGA1P29973 SPINT5P-201ENST00000448174 155 ntBASIC0.69□□□□□ -2.3
CNGA1P29973 RNU6-90P-201ENST00000606352 106 ntBASIC0.69□□□□□ -2.3
CNGA1P29973 AC244669.1-204ENST00000621564 178 ntBASIC0.69□□□□□ -2.3
CNGA1P29973 RNY3P2-201ENST00000362918 102 ntBASIC0.68□□□□□ -2.3
CNGA1P29973 SNORD115-24-201ENST00000363528 82 ntBASIC0.68□□□□□ -2.3
CNGA1P29973 MIR599-201ENST00000385069 95 ntBASIC0.68□□□□□ -2.3
CNGA1P29973 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CNGA1P29973 RNU6-832P-201ENST00000363319 107 ntBASIC0.67□□□□□ -2.3
CNGA1P29973 Y_RNA.173-201ENST00000363776 113 ntBASIC0.67□□□□□ -2.3
CNGA1P29973 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
CNGA1P29973 RNU6-1056P-201ENST00000383996 107 ntBASIC0.67□□□□□ -2.3
CNGA1P29973 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.67□□□□□ -2.3
CNGA1P29973 RNA5SP268-201ENST00000516828 124 ntBASIC0.67□□□□□ -2.3
CNGA1P29973 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 RNU6-1107P-201ENST00000364817 104 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 SNORA19-201ENST00000384737 128 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 MIR518A1-201ENST00000385068 85 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 MIR1197-201ENST00000408818 88 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.66□□□□□ -2.3
CNGA1P29973 RNU7-195P-201ENST00000458793 62 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.66□□□□□ -2.3
CNGA1P29973 AC096720.1-201ENST00000604441 183 ntBASIC0.66□□□□□ -2.3
CNGA1P29973 MIR330-201ENST00000362196 94 ntBASIC0.65□□□□□ -2.31
CNGA1P29973 RNU6-1099P-201ENST00000363533 107 ntBASIC0.65□□□□□ -2.31
CNGA1P29973 SNORD71-201ENST00000411292 86 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms