Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
PTPN4P29074 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 Y_RNA.215-201ENST00000364204 112 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 Y_RNA.221-201ENST00000364248 96 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 MIR34C-201ENST00000384831 77 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 MIR519A1-201ENST00000385257 85 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 SNORD41.1-201ENST00000391000 69 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 Y_RNA.773-201ENST00000607168 90 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 AC021753.1-201ENST00000635724 168 ntBASIC0.04□□□□□ -2.4
PTPN4P29074 RNU6-170P-201ENST00000362832 104 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 Y_RNA.198-201ENST00000364013 98 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 Y_RNA.213-201ENST00000364178 111 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 Y_RNA.360-201ENST00000365512 102 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 RNA5SP136-201ENST00000410906 107 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 SNORD63B-201ENST00000411005 70 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 RPL39P34-201ENST00000477141 156 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 MTND5P41-201ENST00000517498 206 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
PTPN4P29074 RNU6-571P-201ENST00000384128 107 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 MIR1263-201ENST00000408324 86 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 RNU7-195P-201ENST00000458793 62 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 RNU6-521P-201ENST00000516663 105 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 U7.2-201ENST00000607576 63 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 SNORA70.25-201ENST00000612741 95 ntBASIC0.02□□□□□ -2.41
PTPN4P29074 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 MIR610-201ENST00000385139 96 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 RNU6-269P-201ENST00000391077 97 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 MIR892B-201ENST00000401279 77 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 RNU6-735P-201ENST00000410612 107 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 AL158147.1-201ENST00000443970 75 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 Y_RNA.809-201ENST00000516058 95 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 MIR1255B1-201ENST00000636325 63 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
PTPN4P29074 RNU6-35P-201ENST00000384530 107 ntBASIC0□□□□□ -2.41
PTPN4P29074 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
PTPN4P29074 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
PTPN4P29074 MIR5706-201ENST00000579841 80 ntBASIC0□□□□□ -2.41
PTPN4P29074 MIR4743-201ENST00000584576 69 ntBASIC0□□□□□ -2.41
PTPN4P29074 AC090425.1-201ENST00000610007 140 ntBASIC0□□□□□ -2.41
PTPN4P29074 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 MIR501-201ENST00000390204 84 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 MIR759-201ENST00000390224 91 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 RNU6-781P-201ENST00000516377 101 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 RNU6-850P-201ENST00000516934 103 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 AC073869.9-201ENST00000641610 120 ntBASIC-0.01□□□□□ -2.41
PTPN4P29074 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 MIR548H2-201ENST00000408874 88 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 RNU7-106P-201ENST00000459514 67 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 RNA5SP272-201ENST00000516095 111 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 RNU6-426P-201ENST00000516464 97 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 uc_338.28-201ENST00000612082 187 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 MIR6759-201ENST00000638110 65 ntBASIC-0.02□□□□□ -2.41
PTPN4P29074 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 RNU6-524P-201ENST00000384270 107 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 SNORD38.2-201ENST00000384470 69 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 MIR548D2-201ENST00000384955 97 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 RNU6-794P-201ENST00000517261 64 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 MIR3920-201ENST00000581751 86 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 U7.6-201ENST00000610841 64 ntBASIC-0.03□□□□□ -2.41
PTPN4P29074 SNORA7.5-201ENST00000410672 110 ntBASIC-0.04□□□□□ -2.42
PTPN4P29074 MIR548AD-201ENST00000584780 82 ntBASIC-0.04□□□□□ -2.42
PTPN4P29074 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 RNU6-302P-201ENST00000365249 107 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 MIR516A2-201ENST00000384888 90 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 MIR516A1-201ENST00000385033 90 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 RNU7-200P-201ENST00000516105 62 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 RNU7-13P-201ENST00000516413 62 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.05□□□□□ -2.42
PTPN4P29074 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 RNU6-235P-201ENST00000362644 107 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 RNU6-363P-201ENST00000362895 105 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 RNU6-509P-201ENST00000363519 107 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 MIR593-201ENST00000384856 100 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PTPN4P29074 MTND4LP9-201ENST00000427694 174 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 AL353813.1-201ENST00000440700 253 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 MTND5P40-201ENST00000559945 246 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
PTPN4P29074 RNU6-161P-201ENST00000363051 106 ntBASIC-0.07□□□□□ -2.42
PTPN4P29074 SNORD58C-201ENST00000365223 64 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms