Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 SNORD63B-201ENST00000411005 70 ntBASIC1.73□□□□□ -2.13
ATP2B4P23634 AC023790.1-201ENST00000482174 347 ntBASIC1.73□□□□□ -2.13
ATP2B4P23634 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ATP2B4P23634 MIR494-201ENST00000349529 81 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 SNORD26-201ENST00000384147 75 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 RNY1P4-201ENST00000384595 115 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 Y_RNA.536-201ENST00000384621 113 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 AL161932.1-201ENST00000437408 146 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 RNU7-102P-201ENST00000458948 62 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.72□□□□□ -2.13
ATP2B4P23634 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 RNU1-119P-201ENST00000391122 165 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 RNU6-519P-201ENST00000410590 108 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 Y_RNA.620-201ENST00000411009 88 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 Y_RNA.648-201ENST00000459455 110 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 AP003327.1-201ENST00000529684 127 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 MIR6504-201ENST00000613520 61 ntBASIC1.71□□□□□ -2.14
ATP2B4P23634 RNU6-219P-201ENST00000364728 107 ntBASIC1.7□□□□□ -2.14
ATP2B4P23634 SNORD36A-201ENST00000362874 73 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 Y_RNA.388-201ENST00000383919 113 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 Y_RNA.508-201ENST00000384502 114 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 MIR520F-201ENST00000384824 87 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 MIR519A1-201ENST00000385257 85 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 RNU7-56P-201ENST00000458744 62 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 AL136317.1-201ENST00000612653 226 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 MIR7111-201ENST00000619751 72 ntBASIC1.69□□□□□ -2.14
ATP2B4P23634 Y_RNA.355-201ENST00000365462 98 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 MIR19B1-201ENST00000384829 87 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 AC092628.1-201ENST00000436250 252 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 FABP5P4-201ENST00000437203 171 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 RNU7-106P-201ENST00000459514 67 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 TRAJ51-201ENST00000504127 63 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.68□□□□□ -2.14
ATP2B4P23634 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
ATP2B4P23634 RPS29P23-201ENST00000458635 123 ntBASIC1.67□□□□□ -2.14
ATP2B4P23634 RNU6-448P-201ENST00000517052 107 ntBASIC1.67□□□□□ -2.14
ATP2B4P23634 AC019288.1-201ENST00000557918 224 ntBASIC1.67□□□□□ -2.14
ATP2B4P23634 MIR6078-201ENST00000611069 100 ntBASIC1.67□□□□□ -2.14
ATP2B4P23634 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.67□□□□□ -2.14
ATP2B4P23634 RNU6-535P-201ENST00000384722 107 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 MIR518E-201ENST00000385252 88 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 RNU6-267P-201ENST00000516714 103 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 AC138907.6-201ENST00000568401 126 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 AC138869.1-201ENST00000568623 124 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 AC008608.1-201ENST00000603910 127 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 RMST_2.1-201ENST00000617263 136 ntBASIC1.66□□□□□ -2.14
ATP2B4P23634 RNU6-633P-201ENST00000362612 103 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 MIR200A-201ENST00000384875 90 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 RNU6-466P-201ENST00000391224 103 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 RNU7-195P-201ENST00000458793 62 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 RNU6-1110P-201ENST00000516462 101 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 MIR3660-201ENST00000584845 100 ntBASIC1.65□□□□□ -2.15
ATP2B4P23634 SNORA25.8-201ENST00000364831 128 ntBASIC1.64□□□□□ -2.15
ATP2B4P23634 RNU6-291P-201ENST00000384720 107 ntBASIC1.64□□□□□ -2.15
ATP2B4P23634 AC022137.1-201ENST00000483735 151 ntBASIC1.64□□□□□ -2.15
ATP2B4P23634 Y_RNA.809-201ENST00000516058 95 ntBASIC1.64□□□□□ -2.15
ATP2B4P23634 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.64□□□□□ -2.15
ATP2B4P23634 RNU6-509P-201ENST00000363519 107 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 Y_RNA.224-201ENST00000364308 111 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 RNU6-1152P-201ENST00000384576 107 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 SNORA40.6-201ENST00000391153 128 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 AC097635.1-201ENST00000450678 155 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 SNORD4B-201ENST00000459083 72 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 AC004223.1-201ENST00000479840 271 ntBASIC1.63□□□□□ -2.15
ATP2B4P23634 RNU6-242P-201ENST00000384359 107 ntBASIC1.62□□□□□ -2.15
ATP2B4P23634 SNORD89-201ENST00000390981 114 ntBASIC1.62□□□□□ -2.15
ATP2B4P23634 snoU13.11-201ENST00000459219 104 ntBASIC1.62□□□□□ -2.15
ATP2B4P23634 U7.7-201ENST00000459276 60 ntBASIC1.62□□□□□ -2.15
ATP2B4P23634 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
ATP2B4P23634 Y_RNA.73-201ENST00000362910 113 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 RNU6-1260P-201ENST00000362944 107 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 RNA5SP173-201ENST00000364857 136 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 MIR520H-201ENST00000385126 88 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 MIR942-201ENST00000401111 86 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 RNU7-85P-201ENST00000458851 63 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 RNU6-65P-201ENST00000516332 98 ntBASIC1.61□□□□□ -2.15
ATP2B4P23634 Y_RNA.118-201ENST00000363300 101 ntBASIC1.6□□□□□ -2.15
ATP2B4P23634 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
ATP2B4P23634 Y_RNA.283-201ENST00000364798 112 ntBASIC1.6□□□□□ -2.15
ATP2B4P23634 MIR4536-1-201ENST00000583537 88 ntBASIC1.6□□□□□ -2.15
ATP2B4P23634 MIR26B-201ENST00000362251 77 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 MIR519C-201ENST00000385053 87 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 SNORD124-201ENST00000459577 104 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 MIR5588-201ENST00000581890 63 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
ATP2B4P23634 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.59□□□□□ -2.15
ATP2B4P23634 Y_RNA.174-201ENST00000363781 105 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 RNU6-497P-201ENST00000365316 104 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 MIR599-201ENST00000385069 95 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 SNORD105-201ENST00000386910 85 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 Y_RNA.611-201ENST00000410682 108 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 MIR548BB-201ENST00000626714 66 ntBASIC1.58□□□□□ -2.16
ATP2B4P23634 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
ATP2B4P23634 RNU1-124P-201ENST00000363861 145 ntBASIC1.57□□□□□ -2.16
ATP2B4P23634 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.57□□□□□ -2.16
ATP2B4P23634 RNA5SP404-201ENST00000517118 132 ntBASIC1.57□□□□□ -2.16
ATP2B4P23634 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms