Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
NR4A1P22736 MIR378A-201ENST00000362177 66 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 RNU6-524P-201ENST00000384270 107 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 Y_RNA.536-201ENST00000384621 113 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 RNU6-279P-201ENST00000391297 101 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 AL603825.1-201ENST00000438481 80 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
NR4A1P22736 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NR4A1P22736 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
NR4A1P22736 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 Y_RNA.42-201ENST00000362660 108 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU6-466P-201ENST00000391224 103 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU7-106P-201ENST00000459514 67 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU6-65P-201ENST00000516332 98 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU7-156P-201ENST00000517214 74 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 MIR4536-1-201ENST00000583537 88 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 SNORD92-201ENST00000585078 85 ntBASIC1.25□□□□□ -2.21
NR4A1P22736 RNU4-32P-201ENST00000363404 141 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 Y_RNA.244-201ENST00000364484 109 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 Y_RNA.283-201ENST00000364798 112 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 MIR938-201ENST00000401216 83 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 snoU13.11-201ENST00000459219 104 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 TRAJ51-201ENST00000504127 63 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 AC140658.3-201ENST00000567603 271 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 MIR4676-201ENST00000583078 72 ntBASIC1.24□□□□□ -2.21
NR4A1P22736 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NR4A1P22736 Y_RNA.221-201ENST00000364248 96 ntBASIC1.23□□□□□ -2.21
NR4A1P22736 RNU6-364P-201ENST00000384387 107 ntBASIC1.23□□□□□ -2.21
NR4A1P22736 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
NR4A1P22736 Y_RNA.697-201ENST00000516776 113 ntBASIC1.23□□□□□ -2.21
NR4A1P22736 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
NR4A1P22736 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NR4A1P22736 RNU6-1260P-201ENST00000362944 107 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 Y_RNA.316-201ENST00000365118 111 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 RNU6-652P-201ENST00000365488 107 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 RNU6-811P-201ENST00000384069 107 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 Y_RNA.508-201ENST00000384502 114 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 AC092628.1-201ENST00000436250 252 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 RNU6-857P-201ENST00000515893 110 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 Y_RNA.809-201ENST00000516058 95 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.22□□□□□ -2.21
NR4A1P22736 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 AC138869.1-201ENST00000568623 124 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
NR4A1P22736 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NR4A1P22736 RNU6-24P-201ENST00000384440 107 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 AC097635.1-201ENST00000450678 155 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 RNU7-195P-201ENST00000458793 62 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 RNU6-75P-201ENST00000515944 104 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 SNORA25.13-201ENST00000516395 103 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 RNU7-153P-201ENST00000516455 62 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 RNU6-448P-201ENST00000517052 107 ntBASIC1.21□□□□□ -2.22
NR4A1P22736 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
NR4A1P22736 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.21□□□□□ -2.22
NR4A1P22736 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NR4A1P22736 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NR4A1P22736 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 Y_RNA.94-201ENST00000363068 106 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 MIR548U-201ENST00000390728 81 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 AC015818.7-201ENST00000428754 109 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.2□□□□□ -2.22
NR4A1P22736 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
NR4A1P22736 RNU6-369P-201ENST00000362515 102 ntBASIC1.19□□□□□ -2.22
NR4A1P22736 SNORA7.1-201ENST00000363750 139 ntBASIC1.19□□□□□ -2.22
NR4A1P22736 RNU1-119P-201ENST00000391122 165 ntBASIC1.19□□□□□ -2.22
NR4A1P22736 RNU7-102P-201ENST00000458948 62 ntBASIC1.19□□□□□ -2.22
NR4A1P22736 MIR4796-201ENST00000580742 81 ntBASIC1.19□□□□□ -2.22
NR4A1P22736 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NR4A1P22736 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NR4A1P22736 RNU6-624P-201ENST00000363411 107 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 RNU6-957P-201ENST00000363652 99 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 RNU6-535P-201ENST00000384722 107 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
NR4A1P22736 RNU7-56P-201ENST00000458744 62 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
NR4A1P22736 RNU6-315P-201ENST00000362666 107 ntBASIC1.17□□□□□ -2.22
NR4A1P22736 MIR1827-201ENST00000408549 66 ntBASIC1.17□□□□□ -2.22
NR4A1P22736 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
NR4A1P22736 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
NR4A1P22736 MIR3064-201ENST00000581130 66 ntBASIC1.17□□□□□ -2.22
NR4A1P22736 MIR4781-201ENST00000585250 76 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms