Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.5□□□□□ -2.49
CD28P10747 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.5□□□□□ -2.49
CD28P10747 MIR181B2-201ENST00000385004 89 ntBASIC-0.5□□□□□ -2.49
CD28P10747 RNU7-121P-201ENST00000516604 62 ntBASIC-0.5□□□□□ -2.49
CD28P10747 RNY4P20-201ENST00000516678 93 ntBASIC-0.5□□□□□ -2.49
CD28P10747 RNU6-850P-201ENST00000516934 103 ntBASIC-0.5□□□□□ -2.49
CD28P10747 AC087741.2-201ENST00000619415 172 ntBASIC-0.5□□□□□ -2.49
CD28P10747 MIR6844-201ENST00000637122 62 ntBASIC-0.5□□□□□ -2.49
CD28P10747 SNORD115-19-201ENST00000363098 82 ntBASIC-0.51□□□□□ -2.49
CD28P10747 SNORD115-18-201ENST00000363293 82 ntBASIC-0.51□□□□□ -2.49
CD28P10747 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.51□□□□□ -2.49
CD28P10747 SNORD115-17-201ENST00000364612 82 ntBASIC-0.51□□□□□ -2.49
CD28P10747 U8.6-201ENST00000364939 135 ntBASIC-0.51□□□□□ -2.49
CD28P10747 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.51□□□□□ -2.49
CD28P10747 snoU13.19-201ENST00000459148 104 ntBASIC-0.51□□□□□ -2.49
CD28P10747 RNU7-188P-201ENST00000517063 64 ntBASIC-0.51□□□□□ -2.49
CD28P10747 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
CD28P10747 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
CD28P10747 RNU6-508P-201ENST00000363231 103 ntBASIC-0.52□□□□□ -2.49
CD28P10747 RNU4-84P-201ENST00000364200 139 ntBASIC-0.52□□□□□ -2.49
CD28P10747 RNU6-309P-201ENST00000364573 106 ntBASIC-0.52□□□□□ -2.49
CD28P10747 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.52□□□□□ -2.49
CD28P10747 MIR34C-201ENST00000384831 77 ntBASIC-0.52□□□□□ -2.49
CD28P10747 MIR606-201ENST00000384851 96 ntBASIC-0.52□□□□□ -2.49
CD28P10747 RNU6-588P-201ENST00000410281 105 ntBASIC-0.52□□□□□ -2.49
CD28P10747 MIR4473-201ENST00000583731 91 ntBASIC-0.52□□□□□ -2.49
CD28P10747 uc_338.10-201ENST00000621872 182 ntBASIC-0.52□□□□□ -2.49
CD28P10747 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.53□□□□□ -2.49
CD28P10747 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.53□□□□□ -2.49
CD28P10747 RNY1P11-201ENST00000363759 113 ntBASIC-0.53□□□□□ -2.49
CD28P10747 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
CD28P10747 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
CD28P10747 RNU6-239P-201ENST00000390990 99 ntBASIC-0.53□□□□□ -2.49
CD28P10747 RPS29P8-201ENST00000445109 171 ntBASIC-0.53□□□□□ -2.49
CD28P10747 RNU6-175P-201ENST00000516896 107 ntBASIC-0.53□□□□□ -2.49
CD28P10747 YWHAEP2-201ENST00000580066 112 ntBASIC-0.53□□□□□ -2.49
CD28P10747 AL137067.1-201ENST00000615933 120 ntBASIC-0.53□□□□□ -2.49
CD28P10747 SNORD114-15-201ENST00000364687 72 ntBASIC-0.54□□□□□ -2.5
CD28P10747 SNORD114-29-201ENST00000364819 70 ntBASIC-0.54□□□□□ -2.5
CD28P10747 SNORD18B-201ENST00000365659 72 ntBASIC-0.54□□□□□ -2.5
CD28P10747 RNU6-47P-201ENST00000383866 107 ntBASIC-0.54□□□□□ -2.5
CD28P10747 RNU6-738P-201ENST00000384531 106 ntBASIC-0.54□□□□□ -2.5
CD28P10747 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.54□□□□□ -2.5
CD28P10747 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.54□□□□□ -2.5
CD28P10747 MIR2113-201ENST00000459007 91 ntBASIC-0.54□□□□□ -2.5
CD28P10747 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.54□□□□□ -2.5
CD28P10747 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.54□□□□□ -2.5
CD28P10747 AC108081.1-201ENST00000604358 221 ntBASIC-0.54□□□□□ -2.5
CD28P10747 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MIR539-201ENST00000365690 78 ntBASIC-0.55□□□□□ -2.5
CD28P10747 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.55□□□□□ -2.5
CD28P10747 RNU6-30P-201ENST00000384561 107 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MIR516A2-201ENST00000384888 90 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MIR224-201ENST00000384889 81 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MIR516A1-201ENST00000385033 90 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MT-TY-201ENST00000387409 66 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MTCYBP9-201ENST00000431021 303 ntBASIC-0.55□□□□□ -2.5
CD28P10747 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.55□□□□□ -2.5
CD28P10747 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.55□□□□□ -2.5
CD28P10747 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.55□□□□□ -2.5
CD28P10747 MIR548AE1-201ENST00000583292 70 ntBASIC-0.55□□□□□ -2.5
CD28P10747 AC008737.2-201ENST00000599446 118 ntBASIC-0.55□□□□□ -2.5
CD28P10747 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.55□□□□□ -2.5
CD28P10747 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.56□□□□□ -2.5
CD28P10747 SNORD38.2-201ENST00000384470 69 ntBASIC-0.56□□□□□ -2.5
CD28P10747 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
CD28P10747 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.56□□□□□ -2.5
CD28P10747 AC007012.1-201ENST00000567192 175 ntBASIC-0.56□□□□□ -2.5
CD28P10747 MIR4460-201ENST00000577862 86 ntBASIC-0.56□□□□□ -2.5
CD28P10747 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.56□□□□□ -2.5
CD28P10747 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.57□□□□□ -2.5
CD28P10747 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.57□□□□□ -2.5
CD28P10747 RNU6-287P-201ENST00000516230 98 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.57□□□□□ -2.5
CD28P10747 RNU6-111P-201ENST00000517179 105 ntBASIC-0.57□□□□□ -2.5
CD28P10747 MIR3128-201ENST00000581957 66 ntBASIC-0.57□□□□□ -2.5
CD28P10747 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.57□□□□□ -2.5
CD28P10747 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.57□□□□□ -2.5
CD28P10747 MIR3658-201ENST00000636291 56 ntBASIC-0.57□□□□□ -2.5
CD28P10747 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.58□□□□□ -2.5
CD28P10747 SNORD114-11-201ENST00000363738 75 ntBASIC-0.58□□□□□ -2.5
CD28P10747 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.58□□□□□ -2.5
CD28P10747 SNORA51.5-201ENST00000384126 131 ntBASIC-0.58□□□□□ -2.5
CD28P10747 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.58□□□□□ -2.5
CD28P10747 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
CD28P10747 RNU6-521P-201ENST00000516663 105 ntBASIC-0.58□□□□□ -2.5
CD28P10747 MIR4432-201ENST00000581823 84 ntBASIC-0.58□□□□□ -2.5
CD28P10747 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.58□□□□□ -2.5
CD28P10747 AC062037.2-201ENST00000610137 73 ntBASIC-0.58□□□□□ -2.5
CD28P10747 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
CD28P10747 SNORD36A-201ENST00000362874 73 ntBASIC-0.59□□□□□ -2.5
CD28P10747 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.59□□□□□ -2.5
CD28P10747 RNU6-154P-201ENST00000384306 106 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms