Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC008608.1-201ENST00000603910 127 ntBASIC1.17□□□□□ -2.22
SNRPA1P09661 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
SNRPA1P09661 Y_RNA.173-201ENST00000363776 113 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 MIR488-201ENST00000365739 83 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 MIR942-201ENST00000401111 86 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 SNRPGP12-201ENST00000449481 213 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 RNU6-162P-201ENST00000516228 103 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 RNA5SP170-201ENST00000517150 101 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 SNORD92-201ENST00000585078 85 ntBASIC1.16□□□□□ -2.22
SNRPA1P09661 RNU6-1244P-201ENST00000363614 108 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 RNU7-56P-201ENST00000458744 62 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 MIR4439-201ENST00000583746 80 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 MIR6515-201ENST00000619843 57 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 MIR2052-201ENST00000636055 55 ntBASIC1.15□□□□□ -2.23
SNRPA1P09661 MIR101-2-201ENST00000362195 79 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 Y_RNA.342-201ENST00000365352 113 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 RNU6-813P-201ENST00000384691 107 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 RNU1-119P-201ENST00000391122 165 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 MIR4698-201ENST00000577795 80 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 AC103810.7-201ENST00000607821 91 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 U7.3-201ENST00000616123 62 ntBASIC1.14□□□□□ -2.23
SNRPA1P09661 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SNRPA1P09661 RNU6-1131P-201ENST00000364955 107 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 SNORD100-201ENST00000408573 76 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 RNU6-1194P-201ENST00000516208 104 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 Y_RNA.694-201ENST00000516677 117 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 Y_RNA.705-201ENST00000516862 110 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 RNU6-765P-201ENST00000516916 99 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 MALAT1.1-201ENST00000618249 95 ntBASIC1.13□□□□□ -2.23
SNRPA1P09661 MIR181B2-201ENST00000385004 89 ntBASIC1.12□□□□□ -2.23
SNRPA1P09661 FABP5P4-201ENST00000437203 171 ntBASIC1.12□□□□□ -2.23
SNRPA1P09661 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
SNRPA1P09661 MIR5582-201ENST00000579697 68 ntBASIC1.12□□□□□ -2.23
SNRPA1P09661 Y_RNA.290-201ENST00000364879 114 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 RNY1P7-201ENST00000384743 110 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 MIR520H-201ENST00000385126 88 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SNRPA1P09661 RNU6-887P-201ENST00000410660 100 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 RNU6-1110P-201ENST00000516462 101 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
SNRPA1P09661 Y_RNA.57-201ENST00000362806 113 ntBASIC1.1□□□□□ -2.23
SNRPA1P09661 RNU6-49P-201ENST00000384256 107 ntBASIC1.1□□□□□ -2.23
SNRPA1P09661 AC025521.1-201ENST00000621624 286 ntBASIC1.1□□□□□ -2.23
SNRPA1P09661 Y_RNA.96-201ENST00000363092 109 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 Y_RNA.536-201ENST00000384621 113 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 SNORD105-201ENST00000386910 85 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 RNU6-972P-201ENST00000391208 107 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 AL136317.1-201ENST00000612653 226 ntBASIC1.09□□□□□ -2.23
SNRPA1P09661 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SNRPA1P09661 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SNRPA1P09661 RNU6-1125P-201ENST00000363601 107 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 RNU6-480P-201ENST00000384332 107 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 RNU6-535P-201ENST00000384722 107 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 MIR516A2-201ENST00000384888 90 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 MIR516A1-201ENST00000385033 90 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 RNU6-448P-201ENST00000517052 107 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 MIR548H5-201ENST00000580314 60 ntBASIC1.08□□□□□ -2.24
SNRPA1P09661 Y_RNA.56-201ENST00000362798 112 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 Y_RNA.190-201ENST00000363964 101 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 Y_RNA.220-201ENST00000364244 109 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 SNORD58A-201ENST00000383875 65 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 RNU7-106P-201ENST00000459514 67 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 RNA5SP436-201ENST00000516020 115 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 AL513043.2-201ENST00000573941 143 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
SNRPA1P09661 RNU6-1255P-201ENST00000363434 112 ntBASIC1.06□□□□□ -2.24
SNRPA1P09661 RNA5SP245-201ENST00000364239 121 ntBASIC1.06□□□□□ -2.24
SNRPA1P09661 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
SNRPA1P09661 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
SNRPA1P09661 Y_RNA.43-201ENST00000362670 111 ntBASIC1.05□□□□□ -2.24
SNRPA1P09661 RNU7-195P-201ENST00000458793 62 ntBASIC1.05□□□□□ -2.24
SNRPA1P09661 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
SNRPA1P09661 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SNRPA1P09661 Y_RNA.32-201ENST00000362589 110 ntBASIC1.04□□□□□ -2.24
SNRPA1P09661 MIR598-201ENST00000384868 97 ntBASIC1.04□□□□□ -2.24
SNRPA1P09661 RNU7-10P-201ENST00000607194 63 ntBASIC1.04□□□□□ -2.24
SNRPA1P09661 SNORD116-10-201ENST00000363791 102 ntBASIC1.03□□□□□ -2.24
SNRPA1P09661 Y_RNA.369-201ENST00000365568 117 ntBASIC1.03□□□□□ -2.24
SNRPA1P09661 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
SNRPA1P09661 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
SNRPA1P09661 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.03□□□□□ -2.24
SNRPA1P09661 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms