Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Y_RNA.32-201ENST00000362589 110 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 SNORA63.4-201ENST00000362763 126 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU4-58P-201ENST00000363192 141 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-1099P-201ENST00000363533 107 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-44P-201ENST00000384045 107 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-106P-201ENST00000384405 107 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 MIR644A-201ENST00000385262 94 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 SNORD100-201ENST00000408573 76 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-554P-201ENST00000410466 106 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-1018P-201ENST00000516577 106 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 SNORA31.14-201ENST00000516728 116 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 Y_RNA.697-201ENST00000516776 113 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 RNU6-765P-201ENST00000516916 99 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 MIR548Z-201ENST00000584743 97 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 AL442128.1-201ENST00000615151 90 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 uc_338.16-201ENST00000621804 95 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.33
HOXC4P09017 AC091304.10-201ENST00000641554 121 ntBASIC0.48□□□□□ -2.33
HOXC4P09017 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HOXC4P09017 RNU6-535P-201ENST00000384722 107 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 TRAJ51-201ENST00000504127 63 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 RNU6-1194P-201ENST00000516208 104 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 MIR4694-201ENST00000578534 80 ntBASIC0.47□□□□□ -2.33
HOXC4P09017 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
HOXC4P09017 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
HOXC4P09017 MIR101-2-201ENST00000362195 79 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 Y_RNA.49-201ENST00000362714 112 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNY3P2-201ENST00000362918 102 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNU6-832P-201ENST00000363319 107 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 Y_RNA.163-201ENST00000363702 113 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNA5SP222-201ENST00000411039 105 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 AL035461.1-201ENST00000421490 332 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNU7-106P-201ENST00000459514 67 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNU6-412P-201ENST00000516434 106 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RNU6-850P-201ENST00000516934 103 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 RN7SL793P-201ENST00000583259 296 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
HOXC4P09017 MIR18A-201ENST00000362310 71 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 SNORD38.1-201ENST00000363863 68 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-1163P-201ENST00000364516 107 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MIR590-201ENST00000385008 97 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MIR548G-201ENST00000408442 89 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 SPINT5P-201ENST00000448174 155 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 AC109327.2-201ENST00000448339 378 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 SNRPGP12-201ENST00000449481 213 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-109P-201ENST00000516364 107 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-184P-201ENST00000516514 107 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-919P-201ENST00000516731 104 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 RNU6-537P-201ENST00000517277 103 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 AP003327.1-201ENST00000529684 127 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 AC141557.1-201ENST00000540982 400 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MTND5P40-201ENST00000559945 246 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 AC012531.4-201ENST00000616509 177 ntBASIC0.45□□□□□ -2.34
HOXC4P09017 MIR450A1-201ENST00000362262 91 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 Y_RNA.56-201ENST00000362798 112 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 SNORD114-26-201ENST00000363543 72 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 Y_RNA.173-201ENST00000363776 113 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 RNA5SP117-201ENST00000365294 118 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 Y_RNA.377-201ENST00000365644 108 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 Y_RNA.467-201ENST00000384297 102 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 MIR516A2-201ENST00000384888 90 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 MIR516A1-201ENST00000385033 90 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 RNU6-90P-201ENST00000606352 106 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 RNU6-86P-201ENST00000606534 107 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
HOXC4P09017 SNORA51.5-201ENST00000384126 131 ntBASIC0.43□□□□□ -2.34
HOXC4P09017 SNORD63B-201ENST00000411005 70 ntBASIC0.43□□□□□ -2.34
HOXC4P09017 RNU7-195P-201ENST00000458793 62 ntBASIC0.43□□□□□ -2.34
HOXC4P09017 Y_RNA.659-201ENST00000515994 113 ntBASIC0.43□□□□□ -2.34
HOXC4P09017 RNU6-904P-201ENST00000516206 101 ntBASIC0.43□□□□□ -2.34
HOXC4P09017 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
HOXC4P09017 RNU6-755P-201ENST00000364400 103 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 RNU6-756P-201ENST00000383997 107 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 RNU6-571P-201ENST00000384128 107 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 Y_RNA.567-201ENST00000384736 106 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 MIR635-201ENST00000384830 98 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 MIR1302-5-201ENST00000408164 150 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.42□□□□□ -2.34
HOXC4P09017 MIR4777-201ENST00000583710 86 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
HOXC4P09017 RNU6-170P-201ENST00000362832 104 ntBASIC0.41□□□□□ -2.34
HOXC4P09017 Y_RNA.95-201ENST00000363079 95 ntBASIC0.41□□□□□ -2.34
HOXC4P09017 SNORA36.1-201ENST00000363424 132 ntBASIC0.41□□□□□ -2.34
HOXC4P09017 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
HOXC4P09017 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms