Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.82□□□□□ -2.12
KRT1P04264 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
KRT1P04264 AC005520.4-201ENST00000604337 90 ntBASIC1.82□□□□□ -2.12
KRT1P04264 MIR101-2-201ENST00000362195 79 ntBASIC1.81□□□□□ -2.12
KRT1P04264 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
KRT1P04264 MIR513A1-201ENST00000385138 129 ntBASIC1.81□□□□□ -2.12
KRT1P04264 MIR519A1-201ENST00000385257 85 ntBASIC1.81□□□□□ -2.12
KRT1P04264 SNORD41-201ENST00000386967 70 ntBASIC1.81□□□□□ -2.12
KRT1P04264 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.81□□□□□ -2.12
KRT1P04264 MIR548H5-201ENST00000580314 60 ntBASIC1.81□□□□□ -2.12
KRT1P04264 MIR3675-201ENST00000583661 73 ntBASIC1.81□□□□□ -2.12
KRT1P04264 RNU6-330P-201ENST00000363015 107 ntBASIC1.8□□□□□ -2.12
KRT1P04264 Y_RNA.118-201ENST00000363300 101 ntBASIC1.8□□□□□ -2.12
KRT1P04264 RNU6-895P-201ENST00000384125 103 ntBASIC1.8□□□□□ -2.12
KRT1P04264 RNU6-630P-201ENST00000391258 106 ntBASIC1.8□□□□□ -2.12
KRT1P04264 SNORD93-201ENST00000408813 74 ntBASIC1.8□□□□□ -2.12
KRT1P04264 SNORA25.16-201ENST00000516741 121 ntBASIC1.8□□□□□ -2.12
KRT1P04264 RNU11-2P-201ENST00000516898 142 ntBASIC1.8□□□□□ -2.12
KRT1P04264 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
KRT1P04264 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRT1P04264 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
KRT1P04264 MIR377-201ENST00000362145 69 ntBASIC1.79□□□□□ -2.12
KRT1P04264 SNORA25.3-201ENST00000363205 127 ntBASIC1.79□□□□□ -2.12
KRT1P04264 SNORA25.4-201ENST00000363666 124 ntBASIC1.79□□□□□ -2.12
KRT1P04264 RNU6-499P-201ENST00000365615 107 ntBASIC1.79□□□□□ -2.12
KRT1P04264 Y_RNA.536-201ENST00000384621 113 ntBASIC1.79□□□□□ -2.12
KRT1P04264 Y_RNA.588-201ENST00000391254 102 ntBASIC1.79□□□□□ -2.12
KRT1P04264 SNORD100-201ENST00000408573 76 ntBASIC1.79□□□□□ -2.12
KRT1P04264 Y_RNA.606-201ENST00000410579 103 ntBASIC1.79□□□□□ -2.12
KRT1P04264 MIR18B-201ENST00000454574 71 ntBASIC1.79□□□□□ -2.12
KRT1P04264 RNU7-195P-201ENST00000458793 62 ntBASIC1.79□□□□□ -2.12
KRT1P04264 snoU13.9-201ENST00000458927 103 ntBASIC1.79□□□□□ -2.12
KRT1P04264 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
KRT1P04264 RNU6-922P-201ENST00000516753 99 ntBASIC1.79□□□□□ -2.12
KRT1P04264 MIR8053-201ENST00000613344 75 ntBASIC1.79□□□□□ -2.12
KRT1P04264 TRDV1-202ENST00000621643 102 ntBASIC1.79□□□□□ -2.12
KRT1P04264 RNU6-664P-201ENST00000362381 107 ntBASIC1.78□□□□□ -2.12
KRT1P04264 RNU6-1260P-201ENST00000362944 107 ntBASIC1.78□□□□□ -2.12
KRT1P04264 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
KRT1P04264 TRAJ51-201ENST00000504127 63 ntBASIC1.78□□□□□ -2.12
KRT1P04264 Y_RNA.809-201ENST00000516058 95 ntBASIC1.78□□□□□ -2.12
KRT1P04264 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
KRT1P04264 GHRLOS.1-201ENST00000610995 70 ntBASIC1.78□□□□□ -2.12
KRT1P04264 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.77□□□□□ -2.13
KRT1P04264 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
KRT1P04264 RNU6-403P-201ENST00000363163 104 ntBASIC1.77□□□□□ -2.13
KRT1P04264 RNU1-36P-201ENST00000365130 165 ntBASIC1.77□□□□□ -2.13
KRT1P04264 SNORD101-201ENST00000384027 73 ntBASIC1.77□□□□□ -2.13
KRT1P04264 AC097510.1-201ENST00000510945 133 ntBASIC1.77□□□□□ -2.13
KRT1P04264 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRT1P04264 Y_RNA.56-201ENST00000362798 112 ntBASIC1.76□□□□□ -2.13
KRT1P04264 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
KRT1P04264 Y_RNA.443-201ENST00000384135 111 ntBASIC1.76□□□□□ -2.13
KRT1P04264 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
KRT1P04264 MIR9-2-201ENST00000384838 87 ntBASIC1.76□□□□□ -2.13
KRT1P04264 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
KRT1P04264 AL133373.1-201ENST00000497098 94 ntBASIC1.76□□□□□ -2.13
KRT1P04264 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
KRT1P04264 MIR4696-201ENST00000581431 70 ntBASIC1.76□□□□□ -2.13
KRT1P04264 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.76□□□□□ -2.13
KRT1P04264 MIR6516-201ENST00000630554 81 ntBASIC1.76□□□□□ -2.13
KRT1P04264 MIR4498-201ENST00000577599 66 ntBASIC1.75□□□□□ -2.13
KRT1P04264 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
KRT1P04264 MIR4781-201ENST00000585250 76 ntBASIC1.75□□□□□ -2.13
KRT1P04264 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
KRT1P04264 uc_338.6-201ENST00000613544 171 ntBASIC1.75□□□□□ -2.13
KRT1P04264 RNU6-580P-201ENST00000365159 107 ntBASIC1.74□□□□□ -2.13
KRT1P04264 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
KRT1P04264 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KRT1P04264 MIR3140-201ENST00000583685 90 ntBASIC1.74□□□□□ -2.13
KRT1P04264 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.74□□□□□ -2.13
KRT1P04264 AC013244.2-201ENST00000603396 103 ntBASIC1.74□□□□□ -2.13
KRT1P04264 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.74□□□□□ -2.13
KRT1P04264 AC103706.3-201ENST00000636297 85 ntBASIC1.74□□□□□ -2.13
KRT1P04264 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRT1P04264 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
KRT1P04264 SNORD45.1-201ENST00000363181 77 ntBASIC1.73□□□□□ -2.13
KRT1P04264 SNORA24B-201ENST00000384176 131 ntBASIC1.73□□□□□ -2.13
KRT1P04264 SNORD45A-201ENST00000384512 84 ntBASIC1.73□□□□□ -2.13
KRT1P04264 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
KRT1P04264 AL606490.4-201ENST00000423117 127 ntBASIC1.73□□□□□ -2.13
KRT1P04264 AC092628.1-201ENST00000436250 252 ntBASIC1.73□□□□□ -2.13
KRT1P04264 RNU6-947P-201ENST00000516264 106 ntBASIC1.73□□□□□ -2.13
KRT1P04264 RNU6-881P-201ENST00000516813 102 ntBASIC1.73□□□□□ -2.13
KRT1P04264 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
KRT1P04264 AP003716.2-201ENST00000528260 108 ntBASIC1.73□□□□□ -2.13
KRT1P04264 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.73□□□□□ -2.13
KRT1P04264 MTRNR2L2-201ENST00000604882 87 ntBASIC1.73□□□□□ -2.13
KRT1P04264 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRT1P04264 U6.81-201ENST00000612550 106 ntBASIC1.73□□□□□ -2.13
KRT1P04264 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
KRT1P04264 RNU6-1216P-201ENST00000362590 107 ntBASIC1.72□□□□□ -2.13
KRT1P04264 RNU6-935P-201ENST00000410371 100 ntBASIC1.72□□□□□ -2.13
KRT1P04264 AC097635.1-201ENST00000450678 155 ntBASIC1.72□□□□□ -2.13
KRT1P04264 MIR103A2-201ENST00000362154 78 ntBASIC1.71□□□□□ -2.14
KRT1P04264 RNA5SP264-201ENST00000363115 107 ntBASIC1.71□□□□□ -2.14
KRT1P04264 SNORD115-22-201ENST00000364456 82 ntBASIC1.71□□□□□ -2.14
KRT1P04264 MIR1185-1-201ENST00000408598 86 ntBASIC1.71□□□□□ -2.14
KRT1P04264 MIR6082-201ENST00000613604 109 ntBASIC1.71□□□□□ -2.14
KRT1P04264 U6.100-201ENST00000636230 99 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms