Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 Y_RNA.355-201ENST00000365462 98 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 MIR499A-201ENST00000384903 122 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ALDH1A1P00352 RNA5SP95-201ENST00000410319 137 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 RNU6-935P-201ENST00000410371 100 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 RNU6-321P-201ENST00000410912 106 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 JTBP1-201ENST00000441314 247 ntBASIC2.42□□□□□ -2.02
ALDH1A1P00352 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALDH1A1P00352 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALDH1A1P00352 MIR633-201ENST00000384821 98 ntBASIC2.41□□□□□ -2.02
ALDH1A1P00352 AC097635.1-201ENST00000450678 155 ntBASIC2.41□□□□□ -2.02
ALDH1A1P00352 AL133373.1-201ENST00000497098 94 ntBASIC2.41□□□□□ -2.02
ALDH1A1P00352 Y_RNA.697-201ENST00000516776 113 ntBASIC2.41□□□□□ -2.02
ALDH1A1P00352 MIR6082-201ENST00000613604 109 ntBASIC2.41□□□□□ -2.02
ALDH1A1P00352 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.02
ALDH1A1P00352 RNU6-614P-201ENST00000384369 107 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 RNU6-1052P-201ENST00000411398 104 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 RNU6-719P-201ENST00000516671 104 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 U6.59-201ENST00000615686 107 ntBASIC2.4□□□□□ -2.03
ALDH1A1P00352 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ALDH1A1P00352 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ALDH1A1P00352 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ALDH1A1P00352 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ALDH1A1P00352 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
ALDH1A1P00352 Y_RNA.13-201ENST00000362403 112 ntBASIC2.39□□□□□ -2.03
ALDH1A1P00352 MIR451A-201ENST00000385059 72 ntBASIC2.39□□□□□ -2.03
ALDH1A1P00352 RNU7-185P-201ENST00000459215 60 ntBASIC2.39□□□□□ -2.03
ALDH1A1P00352 RNU6-1265P-201ENST00000516342 103 ntBASIC2.39□□□□□ -2.03
ALDH1A1P00352 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALDH1A1P00352 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ALDH1A1P00352 SNORA40.6-201ENST00000391153 128 ntBASIC2.38□□□□□ -2.03
ALDH1A1P00352 SNORA17.3-201ENST00000391159 129 ntBASIC2.38□□□□□ -2.03
ALDH1A1P00352 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
ALDH1A1P00352 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
ALDH1A1P00352 AC015688.6-201ENST00000577737 104 ntBASIC2.38□□□□□ -2.03
ALDH1A1P00352 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ALDH1A1P00352 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.37□□□□□ -2.03
ALDH1A1P00352 RNA5SP264-201ENST00000363115 107 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 RNU6-977P-201ENST00000516411 103 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 RNU6-765P-201ENST00000516916 99 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 MIR8070-201ENST00000616510 88 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 AL109933.3-201ENST00000619095 188 ntBASIC2.37□□□□□ -2.03
ALDH1A1P00352 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
ALDH1A1P00352 MIR103A2-201ENST00000362154 78 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 Y_RNA.258-201ENST00000364613 105 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 RNU6-439P-201ENST00000384188 106 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 MIR599-201ENST00000385069 95 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 RNU6-1177P-201ENST00000391058 104 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 RNU6-947P-201ENST00000516264 106 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 RNU6-752P-201ENST00000516376 102 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 AC069503.3-201ENST00000618674 145 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 AC023934.1-201ENST00000574529 2389 ntBASIC2.36□□□□□ -2.03
ALDH1A1P00352 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
ALDH1A1P00352 AC055731.1-201ENST00000474387 401 ntBASIC2.35□□□□□ -2.03
ALDH1A1P00352 AL359821.1-201ENST00000605519 182 ntBASIC2.35□□□□□ -2.03
ALDH1A1P00352 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
ALDH1A1P00352 RNU6-382P-201ENST00000365181 106 ntBASIC2.34□□□□□ -2.03
ALDH1A1P00352 MIR1257-201ENST00000408490 117 ntBASIC2.34□□□□□ -2.03
ALDH1A1P00352 snoU13.21-201ENST00000459368 105 ntBASIC2.34□□□□□ -2.03
ALDH1A1P00352 Y_RNA.783-201ENST00000613546 102 ntBASIC2.34□□□□□ -2.03
ALDH1A1P00352 MIR4773-1-201ENST00000637203 78 ntBASIC2.34□□□□□ -2.03
ALDH1A1P00352 RNU6-1187P-201ENST00000364771 110 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 TRMT112P2-201ENST00000512910 132 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 AC138907.6-201ENST00000568401 126 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 AC138869.1-201ENST00000568623 124 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 SNORA77B-201ENST00000578179 125 ntBASIC2.33□□□□□ -2.04
ALDH1A1P00352 RNA5SP190-201ENST00000365222 118 ntBASIC2.32□□□□□ -2.04
ALDH1A1P00352 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ALDH1A1P00352 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.32□□□□□ -2.04
ALDH1A1P00352 RNU6-274P-201ENST00000459566 107 ntBASIC2.32□□□□□ -2.04
ALDH1A1P00352 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
ALDH1A1P00352 U3.27-201ENST00000391237 200 ntBASIC2.31□□□□□ -2.04
ALDH1A1P00352 AC244098.3-201ENST00000424803 96 ntBASIC2.31□□□□□ -2.04
ALDH1A1P00352 SNORA25.15-201ENST00000516487 89 ntBASIC2.31□□□□□ -2.04
ALDH1A1P00352 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.3□□□□□ -2.04
ALDH1A1P00352 RNU6-982P-201ENST00000516216 102 ntBASIC2.3□□□□□ -2.04
ALDH1A1P00352 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
ALDH1A1P00352 RNU6-829P-201ENST00000363700 112 ntBASIC2.29□□□□□ -2.04
ALDH1A1P00352 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
ALDH1A1P00352 AP1B1P2-201ENST00000416196 106 ntBASIC2.29□□□□□ -2.04
ALDH1A1P00352 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
ALDH1A1P00352 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALDH1A1P00352 RNA5SP245-201ENST00000364239 121 ntBASIC2.28□□□□□ -2.04
ALDH1A1P00352 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ALDH1A1P00352 SNORA67.5-201ENST00000391036 107 ntBASIC2.28□□□□□ -2.04
ALDH1A1P00352 SNORD83.1-201ENST00000411362 77 ntBASIC2.28□□□□□ -2.04
ALDH1A1P00352 SNORD13-201ENST00000459299 104 ntBASIC2.28□□□□□ -2.04
ALDH1A1P00352 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALDH1A1P00352 MIR125B2-201ENST00000385128 89 ntBASIC2.27□□□□□ -2.05
ALDH1A1P00352 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
ALDH1A1P00352 RNU6-287P-201ENST00000516230 98 ntBASIC2.27□□□□□ -2.05
ALDH1A1P00352 RNU6-1057P-201ENST00000517162 102 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms