Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC009779.6-201ENST00000603972 165 ntBASIC-0.57□□□□□ -2.5
MBD3O95983 MIR376B-201ENST00000614515 100 ntBASIC-0.57□□□□□ -2.5
MBD3O95983 AL162726.3-218ENST00000636401 95 ntBASIC-0.57□□□□□ -2.5
MBD3O95983 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-524P-201ENST00000384270 107 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 MIR617-201ENST00000385030 97 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-239P-201ENST00000390990 99 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 MIR1302-3-201ENST00000408128 138 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-588P-201ENST00000410281 105 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 MTCYBP9-201ENST00000431021 303 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 AC093423.1-201ENST00000440817 142 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.58□□□□□ -2.5
MBD3O95983 SNORD126-201ENST00000459475 77 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 AC074198.2-201ENST00000508153 258 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
MBD3O95983 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.59□□□□□ -2.5
MBD3O95983 uc_338.10-201ENST00000621872 182 ntBASIC-0.59□□□□□ -2.5
MBD3O95983 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
MBD3O95983 SNORA63-201ENST00000363450 132 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 SNORD95.1-201ENST00000364099 68 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 RNU4-84P-201ENST00000364200 139 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 RNU6-616P-201ENST00000384353 107 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 RNU4-63P-201ENST00000411313 118 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 RNU7-106P-201ENST00000459514 67 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 AL137067.1-201ENST00000615933 120 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 FTX_2.1-201ENST00000618816 94 ntBASIC-0.6□□□□□ -2.51
MBD3O95983 MIR655-201ENST00000362159 97 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 MIR196A2-201ENST00000385189 110 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 RNU6-850P-201ENST00000516934 103 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
MBD3O95983 AC062037.2-201ENST00000610137 73 ntBASIC-0.61□□□□□ -2.51
MBD3O95983 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 RNU6-309P-201ENST00000364573 106 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 RNU6-811P-201ENST00000384069 107 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 SNORD38.2-201ENST00000384470 69 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 MIR181B2-201ENST00000385004 89 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 MIR519E-201ENST00000385075 84 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 snoU13.11-201ENST00000459219 104 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 RNA5SP67-201ENST00000516422 131 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 RNY4P20-201ENST00000516678 93 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 MIR3128-201ENST00000581957 66 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 MIR6507-201ENST00000613630 70 ntBASIC-0.62□□□□□ -2.51
MBD3O95983 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.62□□□□□ -2.51
MBD3O95983 SNORD115-19-201ENST00000363098 82 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 SNORD115-18-201ENST00000363293 82 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 SNORD115-17-201ENST00000364612 82 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 MIR3681-201ENST00000580089 72 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 AC087741.2-201ENST00000619415 172 ntBASIC-0.63□□□□□ -2.51
MBD3O95983 SNORA20.1-201ENST00000364790 130 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 RNU6-47P-201ENST00000383866 107 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 RNU6-111P-201ENST00000517179 105 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 MIR548AG2-201ENST00000581228 64 ntBASIC-0.64□□□□□ -2.51
MBD3O95983 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
MBD3O95983 AC244250.2-201ENST00000418731 148 ntBASIC-0.65□□□□□ -2.51
MBD3O95983 YWHAEP2-201ENST00000580066 112 ntBASIC-0.66□□□□□ -2.52
MBD3O95983 RNU6-508P-201ENST00000363231 103 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 RNA5SP205-201ENST00000364653 136 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 U8.6-201ENST00000364939 135 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 MIR34C-201ENST00000384831 77 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 MIR568-201ENST00000385036 95 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 SNORD37.2-201ENST00000391075 66 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 RNU7-188P-201ENST00000517063 64 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 AC072026.1-201ENST00000605023 201 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 MIR4788-201ENST00000639104 80 ntBASIC-0.67□□□□□ -2.52
MBD3O95983 MIR516A2-201ENST00000384888 90 ntBASIC-0.68□□□□□ -2.52
MBD3O95983 MIR516A1-201ENST00000385033 90 ntBASIC-0.68□□□□□ -2.52
MBD3O95983 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.68□□□□□ -2.52
MBD3O95983 AC130289.1-201ENST00000577321 73 ntBASIC-0.68□□□□□ -2.52
MBD3O95983 MIR3163-201ENST00000581592 73 ntBASIC-0.68□□□□□ -2.52
MBD3O95983 RNU6-284P-201ENST00000411105 106 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 MIR2113-201ENST00000459007 91 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 RNU6-521P-201ENST00000516663 105 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 MIR4460-201ENST00000577862 86 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 AC108081.1-201ENST00000604358 221 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 AL590491.3-201ENST00000610731 82 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 U4.1-201ENST00000620349 87 ntBASIC-0.69□□□□□ -2.52
MBD3O95983 MT-TQ-201ENST00000387372 72 ntBASIC-0.7□□□□□ -2.52
MBD3O95983 RNU7-6P-201ENST00000516845 62 ntBASIC-0.7□□□□□ -2.52
MBD3O95983 MIR4473-201ENST00000583731 91 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 1350.2 ms