Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CLDN1O95832 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 MIR548A3-201ENST00000385297 97 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 MIR548I2-201ENST00000408348 149 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 AC244505.6-201ENST00000452829 130 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
CLDN1O95832 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-834P-201ENST00000362367 110 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 Y_RNA.281-201ENST00000364774 94 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 Y_RNA.377-201ENST00000365644 108 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-409P-201ENST00000384114 104 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-571P-201ENST00000384128 107 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 Y_RNA.507-201ENST00000384500 99 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 MIR519A1-201ENST00000385257 85 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-816P-201ENST00000390914 107 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-1268P-201ENST00000391214 107 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU6-1239P-201ENST00000391310 107 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNU4-61P-201ENST00000411243 107 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 RNA5SP94-201ENST00000516917 108 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 MIR548H5-201ENST00000580314 60 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
CLDN1O95832 MIR101-2-201ENST00000362195 79 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 Y_RNA.309-201ENST00000365046 111 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 RNU6-1201P-201ENST00000384227 107 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 RNU6-880P-201ENST00000384526 107 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 Y_RNA.549-201ENST00000384657 102 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
CLDN1O95832 RNU6-62P-201ENST00000516526 102 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 RNU7-10P-201ENST00000607194 63 ntBASIC0.49□□□□□ -2.33
CLDN1O95832 SNORA63.5-201ENST00000363548 123 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 RNA5SP245-201ENST00000364239 121 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 VTRNA1-3-201ENST00000365645 89 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 RNU6-1144P-201ENST00000384247 104 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 MIR548A1-201ENST00000385041 97 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 MIR644A-201ENST00000385262 94 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 SNORA7.5-201ENST00000410672 110 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 SNORA62.5-201ENST00000516634 120 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 MIR4500-201ENST00000579472 76 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 MIR4639-201ENST00000584938 69 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 MIR6828-201ENST00000636181 60 ntBASIC0.48□□□□□ -2.33
CLDN1O95832 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.48□□□□□ -2.33
CLDN1O95832 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CLDN1O95832 SNORD38.1-201ENST00000363863 68 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 SNORD38.2-201ENST00000384470 69 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNU6-476P-201ENST00000384726 107 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNU2-51P-201ENST00000410708 197 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 AC097635.1-201ENST00000450678 155 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNA5SP47-201ENST00000517230 109 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 AC138869.1-201ENST00000568623 124 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 MIR4694-201ENST00000578534 80 ntBASIC0.47□□□□□ -2.33
CLDN1O95832 RNU6-170P-201ENST00000362832 104 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 SNORA36.1-201ENST00000363424 132 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 Y_RNA.155-201ENST00000363632 101 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 Y_RNA.323-201ENST00000365157 109 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 SNORD116-21-201ENST00000384507 92 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 SNORD28-201ENST00000384706 75 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 RNU6-1154P-201ENST00000391001 104 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 BX276092.1-201ENST00000427368 251 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 TRAJ51-201ENST00000504127 63 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 RNU6-313P-201ENST00000516317 112 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 SCARNA16.5-201ENST00000517114 183 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 AC068339.1-201ENST00000526965 141 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 AL442128.1-201ENST00000615151 90 ntBASIC0.46□□□□□ -2.34
CLDN1O95832 Y_RNA.49-201ENST00000362714 112 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 Y_RNA.247-201ENST00000364500 92 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 U8.6-201ENST00000364939 135 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 MIR577-201ENST00000385196 96 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 RNU6-850P-201ENST00000516934 103 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 MIR5009-201ENST00000578736 100 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 AL512310.12-203ENST00000640543 90 ntBASIC0.45□□□□□ -2.34
CLDN1O95832 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CLDN1O95832 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
CLDN1O95832 Y_RNA.35-201ENST00000362601 101 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 Y_RNA.173-201ENST00000363776 113 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 SNORA8.2-201ENST00000384372 139 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 Y_RNA.567-201ENST00000384736 106 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 MIR635-201ENST00000384830 98 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 RNU6-1064P-201ENST00000410626 104 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
CLDN1O95832 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CLDN1O95832 RNY3P2-201ENST00000362918 102 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 RNA5SP403-201ENST00000363598 108 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 MIR548G-201ENST00000408442 89 ntBASIC0.43□□□□□ -2.34
CLDN1O95832 SNORD63B-201ENST00000411005 70 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms