Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 RNU6-972P-201ENST00000391208 107 ntBASIC1.42□□□□□ -2.18
SORBS3O60504 Y_RNA.694-201ENST00000516677 117 ntBASIC1.42□□□□□ -2.18
SORBS3O60504 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
SORBS3O60504 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
SORBS3O60504 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.42□□□□□ -2.18
SORBS3O60504 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SORBS3O60504 MIR96-201ENST00000362288 78 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 Y_RNA.56-201ENST00000362798 112 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 Y_RNA.57-201ENST00000362806 113 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 Y_RNA.342-201ENST00000365352 113 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 MIR635-201ENST00000384830 98 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 RNU6-448P-201ENST00000517052 107 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 AC025627.3-201ENST00000582078 182 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 AC103810.7-201ENST00000607821 91 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.41□□□□□ -2.18
SORBS3O60504 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
SORBS3O60504 RNU6-535P-201ENST00000384722 107 ntBASIC1.4□□□□□ -2.19
SORBS3O60504 RNU6-887P-201ENST00000410660 100 ntBASIC1.4□□□□□ -2.19
SORBS3O60504 RNA5SP220-201ENST00000516298 104 ntBASIC1.4□□□□□ -2.19
SORBS3O60504 MIR181B2-201ENST00000385004 89 ntBASIC1.39□□□□□ -2.19
SORBS3O60504 RNA5SP255-201ENST00000516370 107 ntBASIC1.39□□□□□ -2.19
SORBS3O60504 RNU6-291P-201ENST00000384720 107 ntBASIC1.38□□□□□ -2.19
SORBS3O60504 RNY4P30-201ENST00000410216 95 ntBASIC1.38□□□□□ -2.19
SORBS3O60504 MIR7-2-201ENST00000384970 110 ntBASIC1.37□□□□□ -2.19
SORBS3O60504 U7.3-201ENST00000616123 62 ntBASIC1.37□□□□□ -2.19
SORBS3O60504 SNORD63B-201ENST00000411005 70 ntBASIC1.36□□□□□ -2.19
SORBS3O60504 RNU6-162P-201ENST00000516228 103 ntBASIC1.36□□□□□ -2.19
SORBS3O60504 MALAT1.1-201ENST00000618249 95 ntBASIC1.36□□□□□ -2.19
SORBS3O60504 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
SORBS3O60504 RNU6-1335P-201ENST00000365426 107 ntBASIC1.35□□□□□ -2.19
SORBS3O60504 AC092628.1-201ENST00000436250 252 ntBASIC1.35□□□□□ -2.19
SORBS3O60504 TRAJ51-201ENST00000504127 63 ntBASIC1.35□□□□□ -2.19
SORBS3O60504 RNA5SP170-201ENST00000517150 101 ntBASIC1.35□□□□□ -2.19
SORBS3O60504 MIR516A2-201ENST00000384888 90 ntBASIC1.34□□□□□ -2.19
SORBS3O60504 MIR516A1-201ENST00000385033 90 ntBASIC1.34□□□□□ -2.19
SORBS3O60504 AC138907.6-201ENST00000568401 126 ntBASIC1.34□□□□□ -2.19
SORBS3O60504 AC138869.1-201ENST00000568623 124 ntBASIC1.34□□□□□ -2.19
SORBS3O60504 RNU6-1298P-201ENST00000362456 101 ntBASIC1.33□□□□□ -2.2
SORBS3O60504 Y_RNA.220-201ENST00000364244 109 ntBASIC1.33□□□□□ -2.2
SORBS3O60504 MIR488-201ENST00000365739 83 ntBASIC1.33□□□□□ -2.2
SORBS3O60504 SNORD58A-201ENST00000383875 65 ntBASIC1.33□□□□□ -2.2
SORBS3O60504 Y_RNA.174-201ENST00000363781 105 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 Y_RNA.290-201ENST00000364879 114 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 RNA5SP117-201ENST00000365294 118 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 RNU6-1254P-201ENST00000391266 104 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 AC002350.1-201ENST00000490759 375 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 AL513043.2-201ENST00000573941 143 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.32□□□□□ -2.2
SORBS3O60504 AC025521.1-201ENST00000621624 286 ntBASIC1.32□□□□□ -2.2
SORBS3O60504 SNORD116-10-201ENST00000363791 102 ntBASIC1.31□□□□□ -2.2
SORBS3O60504 RNU6-243P-201ENST00000391140 107 ntBASIC1.31□□□□□ -2.2
SORBS3O60504 RNU7-106P-201ENST00000459514 67 ntBASIC1.31□□□□□ -2.2
SORBS3O60504 MIR4661-201ENST00000582720 75 ntBASIC1.31□□□□□ -2.2
SORBS3O60504 RNA5SP245-201ENST00000364239 121 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 MIR573-201ENST00000384964 99 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 MIR519A1-201ENST00000385257 85 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 SNORD99-201ENST00000408612 74 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 RNU7-195P-201ENST00000458793 62 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 uc_338.16-201ENST00000621804 95 ntBASIC1.3□□□□□ -2.2
SORBS3O60504 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SORBS3O60504 Y_RNA.32-201ENST00000362589 110 ntBASIC1.29□□□□□ -2.2
SORBS3O60504 RNU6-1131P-201ENST00000364955 107 ntBASIC1.29□□□□□ -2.2
SORBS3O60504 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SORBS3O60504 AC097635.1-201ENST00000450678 155 ntBASIC1.29□□□□□ -2.2
SORBS3O60504 Y_RNA.809-201ENST00000516058 95 ntBASIC1.29□□□□□ -2.2
SORBS3O60504 SNORA31.14-201ENST00000516728 116 ntBASIC1.29□□□□□ -2.2
SORBS3O60504 RPS29P1-201ENST00000465274 159 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 RNA5SP480-201ENST00000516840 109 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 MIR5582-201ENST00000579697 68 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 MIR6515-201ENST00000619843 57 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 MIR6767-201ENST00000637302 66 ntBASIC1.28□□□□□ -2.2
SORBS3O60504 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
SORBS3O60504 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
SORBS3O60504 SNORD36A-201ENST00000362874 73 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 MIR520E-201ENST00000384867 87 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 MIR599-201ENST00000385069 95 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 OR2A41P-201ENST00000473586 105 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 AC011195.1-201ENST00000578177 177 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 MIR3612-201ENST00000579753 87 ntBASIC1.27□□□□□ -2.21
SORBS3O60504 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
SORBS3O60504 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SORBS3O60504 Y_RNA.190-201ENST00000363964 101 ntBASIC1.26□□□□□ -2.21
SORBS3O60504 RNY1P7-201ENST00000384743 110 ntBASIC1.26□□□□□ -2.21
SORBS3O60504 RNU6-49P-201ENST00000384256 107 ntBASIC1.25□□□□□ -2.21
SORBS3O60504 AC244505.6-201ENST00000452829 130 ntBASIC1.25□□□□□ -2.21
SORBS3O60504 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
SORBS3O60504 RNU6-469P-201ENST00000516253 101 ntBASIC1.25□□□□□ -2.21
SORBS3O60504 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SORBS3O60504 RNU6-1260P-201ENST00000362944 107 ntBASIC1.24□□□□□ -2.21
SORBS3O60504 Y_RNA.369-201ENST00000365568 117 ntBASIC1.24□□□□□ -2.21
SORBS3O60504 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
SORBS3O60504 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.24□□□□□ -2.21
SORBS3O60504 Y_RNA.43-201ENST00000362670 111 ntBASIC1.23□□□□□ -2.21
SORBS3O60504 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
SORBS3O60504 AC244098.3-201ENST00000424803 96 ntBASIC1.23□□□□□ -2.21
SORBS3O60504 MIR644A-201ENST00000385262 94 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms