Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SHOXO15266 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
SHOXO15266 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SHOXO15266 RNU6-509P-201ENST00000363519 107 ntBASIC1.39□□□□□ -2.19
SHOXO15266 RNA5SP173-201ENST00000364857 136 ntBASIC1.39□□□□□ -2.19
SHOXO15266 Y_RNA.426-201ENST00000384068 113 ntBASIC1.39□□□□□ -2.19
SHOXO15266 RNU6-535P-201ENST00000384722 107 ntBASIC1.39□□□□□ -2.19
SHOXO15266 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
SHOXO15266 MIR9-3-201ENST00000385084 90 ntBASIC1.39□□□□□ -2.19
SHOXO15266 TRAJ51-201ENST00000504127 63 ntBASIC1.39□□□□□ -2.19
SHOXO15266 Y_RNA.809-201ENST00000516058 95 ntBASIC1.39□□□□□ -2.19
SHOXO15266 RNU6-65P-201ENST00000516332 98 ntBASIC1.39□□□□□ -2.19
SHOXO15266 RNU6-448P-201ENST00000517052 107 ntBASIC1.39□□□□□ -2.19
SHOXO15266 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SHOXO15266 RNU6-369P-201ENST00000362515 102 ntBASIC1.38□□□□□ -2.19
SHOXO15266 SNORD115-37-201ENST00000363768 82 ntBASIC1.38□□□□□ -2.19
SHOXO15266 Y_RNA.224-201ENST00000364308 111 ntBASIC1.38□□□□□ -2.19
SHOXO15266 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
SHOXO15266 MIR200A-201ENST00000384875 90 ntBASIC1.38□□□□□ -2.19
SHOXO15266 MIR519C-201ENST00000385053 87 ntBASIC1.38□□□□□ -2.19
SHOXO15266 U8.13-201ENST00000390842 128 ntBASIC1.38□□□□□ -2.19
SHOXO15266 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
SHOXO15266 RNU7-56P-201ENST00000458744 62 ntBASIC1.38□□□□□ -2.19
SHOXO15266 SNORD4B-201ENST00000459083 72 ntBASIC1.38□□□□□ -2.19
SHOXO15266 RNU6-1110P-201ENST00000516462 101 ntBASIC1.38□□□□□ -2.19
SHOXO15266 SNORA25.15-201ENST00000516487 89 ntBASIC1.38□□□□□ -2.19
SHOXO15266 RNU6-267P-201ENST00000516714 103 ntBASIC1.38□□□□□ -2.19
SHOXO15266 MIR5588-201ENST00000581890 63 ntBASIC1.38□□□□□ -2.19
SHOXO15266 AC084768.2-201ENST00000622736 221 ntBASIC1.38□□□□□ -2.19
SHOXO15266 RNU6-1260P-201ENST00000362944 107 ntBASIC1.37□□□□□ -2.19
SHOXO15266 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
SHOXO15266 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
SHOXO15266 Y_RNA.611-201ENST00000410682 108 ntBASIC1.37□□□□□ -2.19
SHOXO15266 RNU7-195P-201ENST00000458793 62 ntBASIC1.37□□□□□ -2.19
SHOXO15266 RNU7-106P-201ENST00000459514 67 ntBASIC1.37□□□□□ -2.19
SHOXO15266 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
SHOXO15266 MIR4536-1-201ENST00000583537 88 ntBASIC1.37□□□□□ -2.19
SHOXO15266 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.37□□□□□ -2.19
SHOXO15266 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.37□□□□□ -2.19
SHOXO15266 Y_RNA.73-201ENST00000362910 113 ntBASIC1.36□□□□□ -2.19
SHOXO15266 Y_RNA.174-201ENST00000363781 105 ntBASIC1.36□□□□□ -2.19
SHOXO15266 RNU6-42P-201ENST00000384165 107 ntBASIC1.36□□□□□ -2.19
SHOXO15266 MIR1236-201ENST00000408340 102 ntBASIC1.36□□□□□ -2.19
SHOXO15266 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
SHOXO15266 AL078603.1-201ENST00000603824 313 ntBASIC1.36□□□□□ -2.19
SHOXO15266 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
SHOXO15266 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
SHOXO15266 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
SHOXO15266 Y_RNA.219-201ENST00000364232 113 ntBASIC1.35□□□□□ -2.19
SHOXO15266 Y_RNA.283-201ENST00000364798 112 ntBASIC1.35□□□□□ -2.19
SHOXO15266 RNU6-497P-201ENST00000365316 104 ntBASIC1.35□□□□□ -2.19
SHOXO15266 RNU6-1276P-201ENST00000365372 104 ntBASIC1.35□□□□□ -2.19
SHOXO15266 RNU6-291P-201ENST00000384720 107 ntBASIC1.35□□□□□ -2.19
SHOXO15266 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
SHOXO15266 snoU13.11-201ENST00000459219 104 ntBASIC1.35□□□□□ -2.19
SHOXO15266 U7.7-201ENST00000459276 60 ntBASIC1.35□□□□□ -2.19
SHOXO15266 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
SHOXO15266 MIR548BB-201ENST00000626714 66 ntBASIC1.35□□□□□ -2.19
SHOXO15266 MIR3202-2-201ENST00000635980 79 ntBASIC1.35□□□□□ -2.19
SHOXO15266 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.35□□□□□ -2.19
SHOXO15266 MIR599-201ENST00000385069 95 ntBASIC1.34□□□□□ -2.19
SHOXO15266 MIR942-201ENST00000401111 86 ntBASIC1.34□□□□□ -2.19
SHOXO15266 MIR6845-201ENST00000613182 61 ntBASIC1.34□□□□□ -2.19
SHOXO15266 MIR8070-201ENST00000616510 88 ntBASIC1.34□□□□□ -2.19
SHOXO15266 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SHOXO15266 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SHOXO15266 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
SHOXO15266 RNU6-979P-201ENST00000383896 107 ntBASIC1.33□□□□□ -2.2
SHOXO15266 MIR548U-201ENST00000390728 81 ntBASIC1.33□□□□□ -2.2
SHOXO15266 RNU7-85P-201ENST00000458851 63 ntBASIC1.33□□□□□ -2.2
SHOXO15266 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.33□□□□□ -2.2
SHOXO15266 RNA5SP220-201ENST00000516298 104 ntBASIC1.33□□□□□ -2.2
SHOXO15266 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
SHOXO15266 MIR6734-201ENST00000621166 68 ntBASIC1.33□□□□□ -2.2
SHOXO15266 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
SHOXO15266 RNU4-32P-201ENST00000363404 141 ntBASIC1.32□□□□□ -2.2
SHOXO15266 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
SHOXO15266 RNU6-811P-201ENST00000384069 107 ntBASIC1.32□□□□□ -2.2
SHOXO15266 MIR520H-201ENST00000385126 88 ntBASIC1.32□□□□□ -2.2
SHOXO15266 SNORD89-201ENST00000390981 114 ntBASIC1.32□□□□□ -2.2
SHOXO15266 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
SHOXO15266 AC006160.2-201ENST00000637708 154 ntBASIC1.32□□□□□ -2.2
SHOXO15266 SNORD114-24-201ENST00000365029 72 ntBASIC1.31□□□□□ -2.2
SHOXO15266 MIR7-2-201ENST00000384970 110 ntBASIC1.31□□□□□ -2.2
SHOXO15266 SNORA67.5-201ENST00000391036 107 ntBASIC1.31□□□□□ -2.2
SHOXO15266 RNU6-592P-201ENST00000411333 103 ntBASIC1.31□□□□□ -2.2
SHOXO15266 AC244505.6-201ENST00000452829 130 ntBASIC1.31□□□□□ -2.2
SHOXO15266 RNU7-171P-201ENST00000459581 62 ntBASIC1.31□□□□□ -2.2
SHOXO15266 AC093729.1-201ENST00000513074 128 ntBASIC1.31□□□□□ -2.2
SHOXO15266 RNA5SP190-201ENST00000365222 118 ntBASIC1.3□□□□□ -2.2
SHOXO15266 RNU6-573P-201ENST00000383938 106 ntBASIC1.3□□□□□ -2.2
SHOXO15266 SNORD105-201ENST00000386910 85 ntBASIC1.3□□□□□ -2.2
SHOXO15266 Y_RNA.607-201ENST00000410597 98 ntBASIC1.3□□□□□ -2.2
SHOXO15266 RNU6-135P-201ENST00000516769 101 ntBASIC1.3□□□□□ -2.2
SHOXO15266 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.3□□□□□ -2.2
SHOXO15266 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.3□□□□□ -2.2
SHOXO15266 AC025627.3-201ENST00000582078 182 ntBASIC1.3□□□□□ -2.2
SHOXO15266 TRDV1-202ENST00000621643 102 ntBASIC1.3□□□□□ -2.2
SHOXO15266 MIR1245B-201ENST00000636115 69 ntBASIC1.3□□□□□ -2.2
SHOXO15266 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms