Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-1056P-201ENST00000383996 107 ntBASIC0.52□□□□□ -2.33
CDX4O14627 RNU6-880P-201ENST00000384526 107 ntBASIC0.52□□□□□ -2.33
CDX4O14627 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
CDX4O14627 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.52□□□□□ -2.33
CDX4O14627 RNU6-448P-201ENST00000517052 107 ntBASIC0.52□□□□□ -2.33
CDX4O14627 AC068339.1-201ENST00000526965 141 ntBASIC0.52□□□□□ -2.33
CDX4O14627 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
CDX4O14627 AP001362.1-201ENST00000625165 124 ntBASIC0.52□□□□□ -2.33
CDX4O14627 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CDX4O14627 Y_RNA.247-201ENST00000364500 92 ntBASIC0.51□□□□□ -2.33
CDX4O14627 Y_RNA.281-201ENST00000364774 94 ntBASIC0.51□□□□□ -2.33
CDX4O14627 Y_RNA.309-201ENST00000365046 111 ntBASIC0.51□□□□□ -2.33
CDX4O14627 MIR573-201ENST00000384964 99 ntBASIC0.51□□□□□ -2.33
CDX4O14627 MIR1912-201ENST00000410389 80 ntBASIC0.51□□□□□ -2.33
CDX4O14627 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.51□□□□□ -2.33
CDX4O14627 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.51□□□□□ -2.33
CDX4O14627 BX276092.1-201ENST00000427368 251 ntBASIC0.51□□□□□ -2.33
CDX4O14627 Y_RNA.697-201ENST00000516776 113 ntBASIC0.51□□□□□ -2.33
CDX4O14627 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.51□□□□□ -2.33
CDX4O14627 MIR5009-201ENST00000578736 100 ntBASIC0.51□□□□□ -2.33
CDX4O14627 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
CDX4O14627 MIR548AI-201ENST00000579940 88 ntBASIC0.51□□□□□ -2.33
CDX4O14627 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.51□□□□□ -2.33
CDX4O14627 MIR101-2-201ENST00000362195 79 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-834P-201ENST00000362367 110 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-1313P-201ENST00000362622 102 ntBASIC0.5□□□□□ -2.33
CDX4O14627 Y_RNA.273-201ENST00000364703 102 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-1107P-201ENST00000364817 104 ntBASIC0.5□□□□□ -2.33
CDX4O14627 Y_RNA.536-201ENST00000384621 113 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-291P-201ENST00000384720 107 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-535P-201ENST00000384722 107 ntBASIC0.5□□□□□ -2.33
CDX4O14627 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
CDX4O14627 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-1194P-201ENST00000516208 104 ntBASIC0.5□□□□□ -2.33
CDX4O14627 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
CDX4O14627 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.5□□□□□ -2.33
CDX4O14627 Y_RNA.32-201ENST00000362589 110 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-1325P-201ENST00000364905 105 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
CDX4O14627 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-1014P-201ENST00000383940 103 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-1201P-201ENST00000384227 107 ntBASIC0.49□□□□□ -2.33
CDX4O14627 MIR577-201ENST00000385196 96 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.49□□□□□ -2.33
CDX4O14627 Y_RNA.629-201ENST00000411368 105 ntBASIC0.49□□□□□ -2.33
CDX4O14627 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-589P-201ENST00000516485 107 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-1018P-201ENST00000516577 106 ntBASIC0.49□□□□□ -2.33
CDX4O14627 SNORA31.14-201ENST00000516728 116 ntBASIC0.49□□□□□ -2.33
CDX4O14627 RNU6-1006P-201ENST00000516998 103 ntBASIC0.49□□□□□ -2.33
CDX4O14627 Y_RNA.49-201ENST00000362714 112 ntBASIC0.48□□□□□ -2.33
CDX4O14627 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
CDX4O14627 SNORD20-201ENST00000384550 80 ntBASIC0.48□□□□□ -2.33
CDX4O14627 MIR644A-201ENST00000385262 94 ntBASIC0.48□□□□□ -2.33
CDX4O14627 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
CDX4O14627 SPINT5P-201ENST00000448174 155 ntBASIC0.48□□□□□ -2.33
CDX4O14627 RNU6-412P-201ENST00000516434 106 ntBASIC0.48□□□□□ -2.33
CDX4O14627 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
CDX4O14627 MTND5P40-201ENST00000559945 246 ntBASIC0.48□□□□□ -2.33
CDX4O14627 MIR3613-201ENST00000579844 87 ntBASIC0.48□□□□□ -2.33
CDX4O14627 AL442128.1-201ENST00000615151 90 ntBASIC0.48□□□□□ -2.33
CDX4O14627 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CDX4O14627 uc_338.16-201ENST00000621804 95 ntBASIC0.48□□□□□ -2.33
CDX4O14627 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.48□□□□□ -2.33
CDX4O14627 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
CDX4O14627 RNU6-1099P-201ENST00000363533 107 ntBASIC0.47□□□□□ -2.33
CDX4O14627 Y_RNA.323-201ENST00000365157 109 ntBASIC0.47□□□□□ -2.33
CDX4O14627 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
CDX4O14627 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
CDX4O14627 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
CDX4O14627 Y_RNA.709-201ENST00000516952 92 ntBASIC0.47□□□□□ -2.33
CDX4O14627 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
CDX4O14627 MIR4514-201ENST00000581410 57 ntBASIC0.47□□□□□ -2.33
CDX4O14627 Y_RNA.56-201ENST00000362798 112 ntBASIC0.46□□□□□ -2.34
CDX4O14627 RNY3P2-201ENST00000362918 102 ntBASIC0.46□□□□□ -2.34
CDX4O14627 RNU6-832P-201ENST00000363319 107 ntBASIC0.46□□□□□ -2.34
CDX4O14627 SNORD38.1-201ENST00000363863 68 ntBASIC0.46□□□□□ -2.34
CDX4O14627 RNU6-35P-201ENST00000384530 107 ntBASIC0.46□□□□□ -2.34
CDX4O14627 RNY4P18-201ENST00000391107 89 ntBASIC0.46□□□□□ -2.34
CDX4O14627 MIR548G-201ENST00000408442 89 ntBASIC0.46□□□□□ -2.34
CDX4O14627 SNORA19.1-201ENST00000410656 129 ntBASIC0.46□□□□□ -2.34
CDX4O14627 TRAJ51-201ENST00000504127 63 ntBASIC0.46□□□□□ -2.34
CDX4O14627 RNU6-850P-201ENST00000516934 103 ntBASIC0.46□□□□□ -2.34
CDX4O14627 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
CDX4O14627 MIR4694-201ENST00000578534 80 ntBASIC0.46□□□□□ -2.34
CDX4O14627 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CDX4O14627 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CDX4O14627 RNU6-106P-201ENST00000384405 107 ntBASIC0.45□□□□□ -2.34
CDX4O14627 SNORD38.2-201ENST00000384470 69 ntBASIC0.45□□□□□ -2.34
CDX4O14627 MIR635-201ENST00000384830 98 ntBASIC0.45□□□□□ -2.34
CDX4O14627 SNRPGP12-201ENST00000449481 213 ntBASIC0.45□□□□□ -2.34
CDX4O14627 RNU7-106P-201ENST00000459514 67 ntBASIC0.45□□□□□ -2.34
CDX4O14627 HAR1A.1-201ENST00000459583 118 ntBASIC0.45□□□□□ -2.34
CDX4O14627 AC141557.1-201ENST00000540982 400 ntBASIC0.45□□□□□ -2.34
CDX4O14627 MIR548H5-201ENST00000580314 60 ntBASIC0.45□□□□□ -2.34
CDX4O14627 RNU6-90P-201ENST00000606352 106 ntBASIC0.45□□□□□ -2.34
CDX4O14627 uc_338.28-201ENST00000612082 187 ntBASIC0.45□□□□□ -2.34
CDX4O14627 Y_RNA.163-201ENST00000363702 113 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms