Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-535P-201ENST00000384722 107 ntBASIC1.1□□□□□ -2.23
CBX4O00257 SNORD100-201ENST00000408573 76 ntBASIC1.1□□□□□ -2.23
CBX4O00257 SNRPGP12-201ENST00000449481 213 ntBASIC1.1□□□□□ -2.23
CBX4O00257 MIR3613-201ENST00000579844 87 ntBASIC1.1□□□□□ -2.23
CBX4O00257 MIR4439-201ENST00000583746 80 ntBASIC1.1□□□□□ -2.23
CBX4O00257 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CBX4O00257 RNU6-32P-201ENST00000383948 107 ntBASIC1.09□□□□□ -2.23
CBX4O00257 RNU6-147P-201ENST00000383983 107 ntBASIC1.09□□□□□ -2.23
CBX4O00257 RNU6-13P-201ENST00000384248 107 ntBASIC1.09□□□□□ -2.23
CBX4O00257 RNU6-12P-201ENST00000384604 107 ntBASIC1.09□□□□□ -2.23
CBX4O00257 Y_RNA.567-201ENST00000384736 106 ntBASIC1.09□□□□□ -2.23
CBX4O00257 RNU6-41P-201ENST00000384741 107 ntBASIC1.09□□□□□ -2.23
CBX4O00257 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CBX4O00257 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
CBX4O00257 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
CBX4O00257 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CBX4O00257 RNU6-153P-201ENST00000364422 104 ntBASIC1.08□□□□□ -2.24
CBX4O00257 RNA5SP117-201ENST00000365294 118 ntBASIC1.08□□□□□ -2.24
CBX4O00257 MIR635-201ENST00000384830 98 ntBASIC1.08□□□□□ -2.24
CBX4O00257 MIR573-201ENST00000384964 99 ntBASIC1.08□□□□□ -2.24
CBX4O00257 RNU6-850P-201ENST00000516934 103 ntBASIC1.08□□□□□ -2.24
CBX4O00257 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
CBX4O00257 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CBX4O00257 RNU6-170P-201ENST00000362832 104 ntBASIC1.07□□□□□ -2.24
CBX4O00257 Y_RNA.95-201ENST00000363079 95 ntBASIC1.07□□□□□ -2.24
CBX4O00257 Y_RNA.96-201ENST00000363092 109 ntBASIC1.07□□□□□ -2.24
CBX4O00257 Y_RNA.173-201ENST00000363776 113 ntBASIC1.07□□□□□ -2.24
CBX4O00257 Y_RNA.174-201ENST00000363781 105 ntBASIC1.07□□□□□ -2.24
CBX4O00257 RNU6-291P-201ENST00000384720 107 ntBASIC1.07□□□□□ -2.24
CBX4O00257 Y_RNA.107-201ENST00000363190 121 ntBASIC1.06□□□□□ -2.24
CBX4O00257 Y_RNA.342-201ENST00000365352 113 ntBASIC1.06□□□□□ -2.24
CBX4O00257 AC109327.2-201ENST00000448339 378 ntBASIC1.06□□□□□ -2.24
CBX4O00257 AC002350.1-201ENST00000490759 375 ntBASIC1.06□□□□□ -2.24
CBX4O00257 AC011195.1-201ENST00000578177 177 ntBASIC1.06□□□□□ -2.24
CBX4O00257 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
CBX4O00257 Y_RNA.93-201ENST00000363066 109 ntBASIC1.05□□□□□ -2.24
CBX4O00257 RNU6-1125P-201ENST00000363601 107 ntBASIC1.05□□□□□ -2.24
CBX4O00257 RNU6-1163P-201ENST00000364516 107 ntBASIC1.05□□□□□ -2.24
CBX4O00257 RNU6-480P-201ENST00000384332 107 ntBASIC1.05□□□□□ -2.24
CBX4O00257 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
CBX4O00257 RNU6-795P-201ENST00000516323 103 ntBASIC1.05□□□□□ -2.24
CBX4O00257 RNU6-537P-201ENST00000517277 103 ntBASIC1.05□□□□□ -2.24
CBX4O00257 AC138907.6-201ENST00000568401 126 ntBASIC1.05□□□□□ -2.24
CBX4O00257 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
CBX4O00257 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
CBX4O00257 Y_RNA.57-201ENST00000362806 113 ntBASIC1.04□□□□□ -2.24
CBX4O00257 Y_RNA.495-201ENST00000384435 112 ntBASIC1.04□□□□□ -2.24
CBX4O00257 RNU6-469P-201ENST00000516253 101 ntBASIC1.04□□□□□ -2.24
CBX4O00257 RNU6-109P-201ENST00000516364 107 ntBASIC1.04□□□□□ -2.24
CBX4O00257 RNU6-184P-201ENST00000516514 107 ntBASIC1.04□□□□□ -2.24
CBX4O00257 AC091304.10-201ENST00000641554 121 ntBASIC1.04□□□□□ -2.24
CBX4O00257 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CBX4O00257 AC092628.1-201ENST00000436250 252 ntBASIC1.03□□□□□ -2.24
CBX4O00257 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
CBX4O00257 RNU6-86P-201ENST00000606534 107 ntBASIC1.03□□□□□ -2.24
CBX4O00257 AC012531.4-201ENST00000616509 177 ntBASIC1.03□□□□□ -2.24
CBX4O00257 MIR2052-201ENST00000636055 55 ntBASIC1.03□□□□□ -2.24
CBX4O00257 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
CBX4O00257 RNU4-45P-201ENST00000365469 141 ntBASIC1.02□□□□□ -2.25
CBX4O00257 RNU6-813P-201ENST00000384691 107 ntBASIC1.02□□□□□ -2.25
CBX4O00257 SNORD63B-201ENST00000411005 70 ntBASIC1.02□□□□□ -2.25
CBX4O00257 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
CBX4O00257 uc_338.16-201ENST00000621804 95 ntBASIC1.02□□□□□ -2.25
CBX4O00257 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.02□□□□□ -2.25
CBX4O00257 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CBX4O00257 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CBX4O00257 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
CBX4O00257 RNU6-1244P-201ENST00000363614 108 ntBASIC1.01□□□□□ -2.25
CBX4O00257 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
CBX4O00257 MTATP6P29-201ENST00000415057 132 ntBASIC1.01□□□□□ -2.25
CBX4O00257 AC244098.3-201ENST00000424803 96 ntBASIC1.01□□□□□ -2.25
CBX4O00257 TRAJ51-201ENST00000504127 63 ntBASIC1.01□□□□□ -2.25
CBX4O00257 SNORA31.14-201ENST00000516728 116 ntBASIC1.01□□□□□ -2.25
CBX4O00257 RNU6-135P-201ENST00000516769 101 ntBASIC1.01□□□□□ -2.25
CBX4O00257 Y_RNA.705-201ENST00000516862 110 ntBASIC1.01□□□□□ -2.25
CBX4O00257 RNU6-158P-201ENST00000517104 100 ntBASIC1.01□□□□□ -2.25
CBX4O00257 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.01□□□□□ -2.25
CBX4O00257 Y_RNA.467-201ENST00000384297 102 ntBASIC1□□□□□ -2.25
CBX4O00257 RNY1P4-201ENST00000384595 115 ntBASIC1□□□□□ -2.25
CBX4O00257 SNORA40.13-201ENST00000516379 120 ntBASIC1□□□□□ -2.25
CBX4O00257 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
CBX4O00257 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
CBX4O00257 MIR4777-201ENST00000583710 86 ntBASIC1□□□□□ -2.25
CBX4O00257 Y_RNA.178-201ENST00000363832 102 ntBASIC0.99□□□□□ -2.25
CBX4O00257 MIR519A1-201ENST00000385257 85 ntBASIC0.99□□□□□ -2.25
CBX4O00257 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
CBX4O00257 AC097635.1-201ENST00000450678 155 ntBASIC0.99□□□□□ -2.25
CBX4O00257 RNU6-168P-201ENST00000516189 101 ntBASIC0.99□□□□□ -2.25
CBX4O00257 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
CBX4O00257 AP001318.4-201ENST00000616637 121 ntBASIC0.99□□□□□ -2.25
CBX4O00257 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
CBX4O00257 MIR516A2-201ENST00000384888 90 ntBASIC0.98□□□□□ -2.25
CBX4O00257 MIR516A1-201ENST00000385033 90 ntBASIC0.98□□□□□ -2.25
CBX4O00257 RNU6-972P-201ENST00000391208 107 ntBASIC0.98□□□□□ -2.25
CBX4O00257 RNU6-1254P-201ENST00000391266 104 ntBASIC0.98□□□□□ -2.25
CBX4O00257 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
CBX4O00257 Y_RNA.677-201ENST00000516401 85 ntBASIC0.98□□□□□ -2.25
CBX4O00257 MIR548Z-201ENST00000584743 97 ntBASIC0.98□□□□□ -2.25
CBX4O00257 RNA5SP245-201ENST00000364239 121 ntBASIC0.97□□□□□ -2.25
CBX4O00257 MIR181B2-201ENST00000385004 89 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 401.1 ms