Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU7-156P-201ENST00000517214 74 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR101-2-201ENST00000362195 79 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-154P-201ENST00000384306 106 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR9-2-201ENST00000384838 87 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR2115-201ENST00000516657 100 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR3140-201ENST00000583685 90 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 AC013244.2-201ENST00000603396 103 ntBASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-654P-201ENST00000364373 107 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MTND4LP19-201ENST00000403051 166 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORD100-201ENST00000408573 76 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 TRDV1-202ENST00000621643 102 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.239-201ENST00000364444 113 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MT-TF-201ENST00000387314 71 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORA67.6-201ENST00000391093 99 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-1052P-201ENST00000411398 104 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-719P-201ENST00000516671 104 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU11-2P-201ENST00000516898 142 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR4303-201ENST00000581299 66 ntBASIC1.59□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-340P-201ENST00000364005 107 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-895P-201ENST00000384125 103 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 SNORD45A-201ENST00000384512 84 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-291P-201ENST00000384720 107 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RPL30P7-201ENST00000479312 323 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 Y_RNA.809-201ENST00000516058 95 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.58□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC023934.1-201ENST00000574529 2389 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-630P-201ENST00000391258 106 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR942-201ENST00000401111 86 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC093423.1-201ENST00000440817 142 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC005520.4-201ENST00000604337 90 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 snoU13.31-201ENST00000607291 104 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 U6.100-201ENST00000636230 99 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR1185-1-201ENST00000408598 86 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 JTBP1-201ENST00000441314 247 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 snoU13.21-201ENST00000459368 105 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-664P-201ENST00000362381 107 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNY4P3-201ENST00000365254 95 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-471P-201ENST00000383944 106 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 SNORD101-201ENST00000384027 73 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MT-TN-201ENST00000387400 73 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC092628.1-201ENST00000436250 252 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR2113-201ENST00000459007 91 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 Y_RNA.697-201ENST00000516776 113 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR548H5-201ENST00000580314 60 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR4696-201ENST00000581431 70 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 MIR3675-201ENST00000583661 73 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 SNORD45.1-201ENST00000363181 77 ntBASIC1.54□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU6-987P-201ENST00000384759 104 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 SNORD83.1-201ENST00000411362 77 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 RNU7-185P-201ENST00000459215 60 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.53□□□□□ -2.16
C1QTNF3-AMACRE9PGA6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms