Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-850P-201ENST00000516934 103 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.213-201ENST00000364178 111 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-726P-201ENST00000364680 107 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-1062P-201ENST00000383908 107 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 MIR4639-201ENST00000584938 69 ntBASIC0.23□□□□□ -2.37
TRIM49D1C9J1S8 AL157777.2-201ENST00000258070 137 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 MIR548A1-201ENST00000385041 97 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-816P-201ENST00000390914 107 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNA5SP136-201ENST00000410906 107 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-659P-201ENST00000516454 104 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 MIR3914-2-201ENST00000637339 95 ntBASIC0.22□□□□□ -2.37
TRIM49D1C9J1S8 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 SNORA2A-201ENST00000383885 135 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 MIR548AG2-201ENST00000581228 64 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 MIR548Z-201ENST00000584743 97 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 AC091304.10-201ENST00000641554 121 ntBASIC0.21□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-363P-201ENST00000362895 105 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-524P-201ENST00000384270 107 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-269P-201ENST00000391077 97 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 AL365222.1-201ENST00000614661 98 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 MIR924-201ENST00000638017 53 ntBASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
TRIM49D1C9J1S8 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-170P-201ENST00000362832 104 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-704P-201ENST00000364162 103 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-746P-201ENST00000384112 109 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 MIR635-201ENST00000384830 98 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 MIR577-201ENST00000385196 96 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 SNORA19.1-201ENST00000410656 129 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 AC138869.1-201ENST00000568623 124 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 MIR548H5-201ENST00000580314 60 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 MIR499B-201ENST00000636498 73 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 AL512310.12-203ENST00000640543 90 ntBASIC0.19□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 AC097635.1-201ENST00000450678 155 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 RNA5SP330-201ENST00000517096 96 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 AL162726.3-218ENST00000636401 95 ntBASIC0.18□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 MIR643-201ENST00000385267 97 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 MIR760-201ENST00000390220 80 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 SPINT5P-201ENST00000448174 155 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 RNA5SP484-201ENST00000458857 111 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 Y_RNA.712-201ENST00000517011 92 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 AC007012.1-201ENST00000567192 175 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 MIR3920-201ENST00000581751 86 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 MIR8087-201ENST00000612745 78 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 U6.100-201ENST00000636230 99 ntBASIC0.17□□□□□ -2.38
TRIM49D1C9J1S8 SNORD116-14-201ENST00000383894 92 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 SNORD116-17-201ENST00000383929 92 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-409P-201ENST00000384114 104 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-571P-201ENST00000384128 107 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-80P-201ENST00000384195 107 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 SNORD116-15-201ENST00000384445 92 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 SNORD116-19-201ENST00000384729 92 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 MIR501-201ENST00000390204 84 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-127P-201ENST00000390897 107 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 MIR548L-201ENST00000408303 86 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 MIR548G-201ENST00000408442 89 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 MTND5P40-201ENST00000559945 246 ntBASIC0.16□□□□□ -2.38
TRIM49D1C9J1S8 RNU6-957P-201ENST00000363652 99 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 Y_RNA.323-201ENST00000365157 109 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 MIR548H2-201ENST00000408874 88 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 snoU13.11-201ENST00000459219 104 ntBASIC0.15□□□□□ -2.39
TRIM49D1C9J1S8 RPL39P34-201ENST00000477141 156 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms