Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
SRRM4A7MD48 Y_RNA.697-201ENST00000516776 113 ntBASIC0.56□□□□□ -2.32
SRRM4A7MD48 RNU6-765P-201ENST00000516916 99 ntBASIC0.56□□□□□ -2.32
SRRM4A7MD48 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
SRRM4A7MD48 RNU4-36P-201ENST00000364294 144 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 RNU6-147P-201ENST00000383983 107 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 MIR548G-201ENST00000408442 89 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 AC244098.3-201ENST00000424803 96 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 SNRPGP12-201ENST00000449481 213 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 RNU6-537P-201ENST00000517277 103 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 MTND5P40-201ENST00000559945 246 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 AC096720.1-201ENST00000604441 183 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 AC091304.10-201ENST00000641554 121 ntBASIC0.55□□□□□ -2.32
SRRM4A7MD48 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SRRM4A7MD48 MIR101-2-201ENST00000362195 79 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 Y_RNA.78-201ENST00000362970 110 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-153P-201ENST00000364422 104 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-1113P-201ENST00000384348 107 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-291P-201ENST00000384720 107 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 SNORD100-201ENST00000408573 76 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 Y_RNA.601-201ENST00000410500 113 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 SPINT5P-201ENST00000448174 155 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-109P-201ENST00000516364 107 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-184P-201ENST00000516514 107 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-448P-201ENST00000517052 107 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 AP003327.1-201ENST00000529684 127 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 CYP3A137P-201ENST00000562436 69 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 AL590095.2-201ENST00000604136 117 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 RNU6-90P-201ENST00000606352 106 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.54□□□□□ -2.32
SRRM4A7MD48 Y_RNA.10-201ENST00000362371 110 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 RNU6-170P-201ENST00000362832 104 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 Y_RNA.173-201ENST00000363776 113 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 SNORD45B-201ENST00000364617 72 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 RNU6-571P-201ENST00000384128 107 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 Y_RNA.536-201ENST00000384621 113 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.53□□□□□ -2.32
SRRM4A7MD48 SCARNA23-201ENST00000516060 130 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 RNU6-795P-201ENST00000516323 103 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 RNU6-850P-201ENST00000516934 103 ntBASIC0.53□□□□□ -2.32
SRRM4A7MD48 Y_RNA.95-201ENST00000363079 95 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 RNU6-1163P-201ENST00000364516 107 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 RNU6-535P-201ENST00000384722 107 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SRRM4A7MD48 AC109327.2-201ENST00000448339 378 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 AC002350.1-201ENST00000490759 375 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 MIR548Z-201ENST00000584743 97 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 AC012531.4-201ENST00000616509 177 ntBASIC0.52□□□□□ -2.33
SRRM4A7MD48 Y_RNA.32-201ENST00000362589 110 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.56-201ENST00000362798 112 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNA5SP245-201ENST00000364239 121 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNU6-32P-201ENST00000383948 107 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNU6-13P-201ENST00000384248 107 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.467-201ENST00000384297 102 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNU6-12P-201ENST00000384604 107 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.544-201ENST00000384650 113 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.567-201ENST00000384736 106 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNU6-41P-201ENST00000384741 107 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 TRAJ51-201ENST00000504127 63 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 SNORA31.14-201ENST00000516728 116 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 MIR548H5-201ENST00000580314 60 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 RNU6-86P-201ENST00000606534 107 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.818-201ENST00000618813 71 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 uc_338.16-201ENST00000621804 95 ntBASIC0.51□□□□□ -2.33
SRRM4A7MD48 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SRRM4A7MD48 Y_RNA.107-201ENST00000363190 121 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 RNU6-1244P-201ENST00000363614 108 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 RNA5SP117-201ENST00000365294 118 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 Y_RNA.342-201ENST00000365352 113 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 Y_RNA.495-201ENST00000384435 112 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 MIR635-201ENST00000384830 98 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 SNORD63B-201ENST00000411005 70 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 MIR4777-201ENST00000583710 86 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 RNU7-10P-201ENST00000607194 63 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
SRRM4A7MD48 MIR6515-201ENST00000619843 57 ntBASIC0.5□□□□□ -2.33
SRRM4A7MD48 Y_RNA.57-201ENST00000362806 113 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 Y_RNA.93-201ENST00000363066 109 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 Y_RNA.174-201ENST00000363781 105 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 Y_RNA.466-201ENST00000384294 113 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 MIR516A2-201ENST00000384888 90 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 MIR181B2-201ENST00000385004 89 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 MIR516A1-201ENST00000385033 90 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
SRRM4A7MD48 RNU7-61P-201ENST00000515897 61 ntBASIC0.49□□□□□ -2.33
SRRM4A7MD48 MIR4439-201ENST00000583746 80 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms