Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 AL121914.1-201ENST00000450188 156 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 AL500527.2-201ENST00000454105 95 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 RNU7-106P-201ENST00000459514 67 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 MIR4744-201ENST00000581563 82 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 AP001362.1-201ENST00000625165 124 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 AC093726.3-201ENST00000637588 150 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 SNORD115-44-201ENST00000365391 82 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 RNU6-472P-201ENST00000384299 107 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 SNORA49-201ENST00000386157 136 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 MIR196A1-201ENST00000388006 70 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 RNU6-578P-201ENST00000390980 103 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 RNU4-69P-201ENST00000410677 143 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 MTND3P22-201ENST00000510932 243 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 MIR4795-201ENST00000584182 89 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 AC011603.4-201ENST00000611325 277 ntBASIC-0.69□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 RNU6-690P-201ENST00000365242 106 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 AL445193.1-201ENST00000441183 141 ntBASIC-0.7□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU6-47P-201ENST00000383866 107 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU6-643P-201ENST00000384018 107 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU6-474P-201ENST00000384243 107 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU6-154P-201ENST00000384306 106 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 MT-TY-201ENST00000387409 66 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 AC113618.1-201ENST00000416747 285 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU6-881P-201ENST00000516813 102 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 RNU2-4P-201ENST00000606190 192 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 MIR376B-201ENST00000614515 100 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 MIR6851-201ENST00000617060 67 ntBASIC-0.71□□□□□ -2.52
USH1CQ9Y6N9 MIR335-201ENST00000362173 94 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 MIR2113-201ENST00000459007 91 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 MIR4460-201ENST00000577862 86 ntBASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.72□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 RNU6-900P-201ENST00000384498 102 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 AC007012.1-201ENST00000567192 175 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 MIR4643-201ENST00000577473 78 ntBASIC-0.73□□□□□ -2.53
USH1CQ9Y6N9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNU4-36P-201ENST00000364294 144 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 SNORA51.5-201ENST00000384126 131 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNY1P7-201ENST00000384743 110 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 snoU13.13-201ENST00000458842 104 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNU7-164P-201ENST00000459221 62 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNU6-240P-201ENST00000516098 97 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 SCARNA17-201ENST00000516183 144 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNU6-287P-201ENST00000516230 98 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 RNU6-850P-201ENST00000516934 103 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 AP001328.1-201ENST00000528550 176 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 AC009779.6-201ENST00000603972 165 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 AC021443.1-201ENST00000604478 211 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 AC087741.2-201ENST00000619415 172 ntBASIC-0.74□□□□□ -2.53
USH1CQ9Y6N9 SNORD115-35-201ENST00000365122 82 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 MT-TQ-201ENST00000387372 72 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 snoU13.11-201ENST00000459219 104 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 RNU6-988P-201ENST00000519081 107 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 AC138907.4-201ENST00000570107 226 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 MIR4680-201ENST00000580906 66 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 MTND4P29-201ENST00000503122 1372 ntBASIC-0.75□□□□□ -2.53
USH1CQ9Y6N9 MIR20A-201ENST00000362279 71 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 MIR516A2-201ENST00000384888 90 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 MIR516A1-201ENST00000385033 90 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 MTND5P20-201ENST00000448677 143 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 RNA5SP67-201ENST00000516422 131 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 MIR548AX-201ENST00000580117 73 ntBASIC-0.76□□□□□ -2.53
USH1CQ9Y6N9 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.77□□□□□ -2.53
USH1CQ9Y6N9 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 896.8 ms