Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 MIR635-201ENST00000384830 98 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 MIR588-201ENST00000384900 83 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 RNA5SP237-201ENST00000410414 113 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 AC004965.1-201ENST00000413033 213 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 RNU6-634P-201ENST00000459134 106 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 Y_RNA.660-201ENST00000516002 120 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 U6.109-201ENST00000636749 87 ntBASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HS3ST3A1Q9Y663 Y_RNA.283-201ENST00000364798 112 ntBASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4498-201ENST00000577599 66 ntBASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 AC104996.3-201ENST00000590718 94 ntBASIC1.65□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-540P-201ENST00000384622 101 ntBASIC1.64□□□□□ -2.15
HS3ST3A1Q9Y663 snoU13.17-201ENST00000458802 104 ntBASIC1.64□□□□□ -2.15
HS3ST3A1Q9Y663 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4536-1-201ENST00000583537 88 ntBASIC1.64□□□□□ -2.15
HS3ST3A1Q9Y663 AL096861.1-201ENST00000610899 123 ntBASIC1.64□□□□□ -2.15
HS3ST3A1Q9Y663 MIR378A-201ENST00000362177 66 ntBASIC1.63□□□□□ -2.15
HS3ST3A1Q9Y663 Y_RNA.338-201ENST00000365320 114 ntBASIC1.63□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-1254P-201ENST00000391266 104 ntBASIC1.63□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4484-201ENST00000582855 83 ntBASIC1.63□□□□□ -2.15
HS3ST3A1Q9Y663 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
HS3ST3A1Q9Y663 RNU5F-1-201ENST00000362507 117 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 MIR518E-201ENST00000385252 88 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 SNORD77.2-201ENST00000391045 68 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 Y_RNA.588-201ENST00000391254 102 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 RNU4-62P-201ENST00000410125 130 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-70P-201ENST00000516438 60 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 SNORA4-201ENST00000584302 138 ntBASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HS3ST3A1Q9Y663 MIRLET7F1-201ENST00000362202 87 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-957P-201ENST00000363652 99 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 Y_RNA.491-201ENST00000384417 107 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 AP1B1P2-201ENST00000416196 106 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 AC245517.4-201ENST00000448601 281 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 MIR2113-201ENST00000459007 91 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 MIR1297-201ENST00000637311 77 ntBASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HS3ST3A1Q9Y663 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 Y_RNA.340-201ENST00000365330 92 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-1165P-201ENST00000410119 107 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 SNORA44.1-201ENST00000517031 108 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-303P-201ENST00000517091 106 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4491-201ENST00000581087 68 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 snoU13.31-201ENST00000607291 104 ntBASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
HS3ST3A1Q9Y663 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 MIR337-201ENST00000362281 93 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-208P-201ENST00000362431 107 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-330P-201ENST00000363015 107 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 SNORA25.3-201ENST00000363205 127 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNA5SP48-201ENST00000363969 126 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 SNORD115-31-201ENST00000365318 82 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 MT-TN-201ENST00000387400 73 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-243P-201ENST00000391140 107 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-587P-201ENST00000391282 106 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-871P-201ENST00000516122 100 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-1194P-201ENST00000516208 104 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 RNU6-531P-201ENST00000516694 104 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 SNORA25.16-201ENST00000516741 121 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 MIR4264-201ENST00000583520 66 ntBASIC1.59□□□□□ -2.15
HS3ST3A1Q9Y663 Y_RNA.264-201ENST00000364665 102 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 SNORA25.9-201ENST00000365087 128 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-580P-201ENST00000365159 107 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 MIR1185-1-201ENST00000408598 86 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-380P-201ENST00000410207 107 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 SNORD63B-201ENST00000411005 70 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 AL606490.4-201ENST00000423117 127 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 AC125388.1-201ENST00000459631 156 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 RPL30P7-201ENST00000479312 323 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-322P-201ENST00000516010 103 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 SNORD92-201ENST00000585078 85 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 AC103810.8-201ENST00000607347 118 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 MIR6516-201ENST00000630554 81 ntBASIC1.58□□□□□ -2.16
HS3ST3A1Q9Y663 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 Y_RNA.205-201ENST00000364128 113 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-396P-201ENST00000365369 105 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-205P-201ENST00000390858 107 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 TRAJ51-201ENST00000504127 63 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 Y_RNA.681-201ENST00000516445 113 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 RNU6-807P-201ENST00000516805 107 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 SNORA77B-201ENST00000578179 125 ntBASIC1.57□□□□□ -2.16
HS3ST3A1Q9Y663 YWHAEP2-201ENST00000580066 112 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 1523.8 ms