Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MIR4298-201ENST00000584380 73 ntBASIC1.32□□□□□ -2.2
GTF3C3Q9Y5Q9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 RNY3P2-201ENST00000362918 102 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 RNU6-1014P-201ENST00000383940 103 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 BX276092.1-201ENST00000427368 251 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR6129-201ENST00000616087 109 ntBASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
GTF3C3Q9Y5Q9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR6715A-201ENST00000615929 79 ntBASIC1.3□□□□□ -2.2
GTF3C3Q9Y5Q9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.3□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR548G-201ENST00000408442 89 ntBASIC1.29□□□□□ -2.2
GTF3C3Q9Y5Q9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.29□□□□□ -2.2
GTF3C3Q9Y5Q9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 RNU4-36P-201ENST00000364294 144 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR1302-5-201ENST00000408164 150 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 AL353813.1-201ENST00000440700 253 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 RNU6-1006P-201ENST00000516998 103 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 AC141557.1-201ENST00000540982 400 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
GTF3C3Q9Y5Q9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-170P-201ENST00000362832 104 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR577-201ENST00000385196 96 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 AC092628.1-201ENST00000436250 252 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 SNRPGP12-201ENST00000449481 213 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR4524B-201ENST00000581569 115 ntBASIC1.27□□□□□ -2.21
GTF3C3Q9Y5Q9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-832P-201ENST00000363319 107 ntBASIC1.26□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.26□□□□□ -2.21
GTF3C3Q9Y5Q9 Y_RNA.342-201ENST00000365352 113 ntBASIC1.26□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR146A-201ENST00000385201 99 ntBASIC1.26□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-1290P-201ENST00000362957 109 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU4-38P-201ENST00000364472 129 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR644A-201ENST00000385262 94 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR140-201ENST00000385282 100 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-850P-201ENST00000516934 103 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 AC104984.5-201ENST00000586878 94 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 AL590095.2-201ENST00000604136 117 ntBASIC1.25□□□□□ -2.21
GTF3C3Q9Y5Q9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-589P-201ENST00000516485 107 ntBASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.24□□□□□ -2.21
GTF3C3Q9Y5Q9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
GTF3C3Q9Y5Q9 Y_RNA.709-201ENST00000516952 92 ntBASIC1.23□□□□□ -2.21
GTF3C3Q9Y5Q9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.23□□□□□ -2.21
GTF3C3Q9Y5Q9 MIR4639-201ENST00000584938 69 ntBASIC1.23□□□□□ -2.21
GTF3C3Q9Y5Q9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-1325P-201ENST00000364905 105 ntBASIC1.22□□□□□ -2.21
GTF3C3Q9Y5Q9 RNU6-482P-201ENST00000391068 107 ntBASIC1.22□□□□□ -2.21
GTF3C3Q9Y5Q9 AC244505.6-201ENST00000452829 130 ntBASIC1.22□□□□□ -2.21
GTF3C3Q9Y5Q9 Y_RNA.78-201ENST00000362970 110 ntBASIC1.21□□□□□ -2.22
GTF3C3Q9Y5Q9 MIR519A1-201ENST00000385257 85 ntBASIC1.21□□□□□ -2.22
GTF3C3Q9Y5Q9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.21□□□□□ -2.22
GTF3C3Q9Y5Q9 AP1B1P2-201ENST00000416196 106 ntBASIC1.21□□□□□ -2.22
GTF3C3Q9Y5Q9 MIR4439-201ENST00000583746 80 ntBASIC1.21□□□□□ -2.22
GTF3C3Q9Y5Q9 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 SNORD45B-201ENST00000364617 72 ntBASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 TRAJ51-201ENST00000504127 63 ntBASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.659-201ENST00000515994 113 ntBASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
GTF3C3Q9Y5Q9 RNA5SP432-201ENST00000362480 116 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 RNA5SP245-201ENST00000364239 121 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 RNU6-480P-201ENST00000384332 107 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.601-201ENST00000410500 113 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 SNORD63B-201ENST00000411005 70 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 AC097635.1-201ENST00000450678 155 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 AC018659.1-201ENST00000551083 169 ntBASIC1.19□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.18□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.163-201ENST00000363702 113 ntBASIC1.17□□□□□ -2.22
GTF3C3Q9Y5Q9 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.247-201ENST00000364500 92 ntBASIC1.17□□□□□ -2.22
GTF3C3Q9Y5Q9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 AL606490.4-201ENST00000423117 127 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 Y_RNA.809-201ENST00000516058 95 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 RNA5SP94-201ENST00000516917 108 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 AC092634.7-201ENST00000621022 103 ntBASIC1.16□□□□□ -2.22
GTF3C3Q9Y5Q9 SNORD28-201ENST00000384706 75 ntBASIC1.15□□□□□ -2.23
GTF3C3Q9Y5Q9 MIR4769-201ENST00000584126 77 ntBASIC1.15□□□□□ -2.23
GTF3C3Q9Y5Q9 Y_RNA.57-201ENST00000362806 113 ntBASIC1.14□□□□□ -2.23
GTF3C3Q9Y5Q9 MIR599-201ENST00000385069 95 ntBASIC1.14□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.14□□□□□ -2.23
GTF3C3Q9Y5Q9 SNORD115-24-201ENST00000363528 82 ntBASIC1.13□□□□□ -2.23
GTF3C3Q9Y5Q9 SNORD114-2-201ENST00000363953 78 ntBASIC1.13□□□□□ -2.23
GTF3C3Q9Y5Q9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.13□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-243P-201ENST00000391140 107 ntBASIC1.12□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-351P-201ENST00000516097 100 ntBASIC1.12□□□□□ -2.23
GTF3C3Q9Y5Q9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 RNA5SP458-201ENST00000516188 119 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 RNA5SP121-201ENST00000516537 101 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.11□□□□□ -2.23
GTF3C3Q9Y5Q9 RNA5SP47-201ENST00000517230 109 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms