Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-1094P-201ENST00000362416 104 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA25.9-201ENST00000365087 128 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 RPS26P5-201ENST00000418544 335 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 Y_RNA.809-201ENST00000516058 95 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU7-156P-201ENST00000517214 74 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
PCDHGA11Q9Y5H2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-364P-201ENST00000384387 107 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA11.2-201ENST00000408318 127 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 AC092628.1-201ENST00000436250 252 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU7-195P-201ENST00000458793 62 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU7-90P-201ENST00000459216 62 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA18.5-201ENST00000516616 101 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR4435-1-201ENST00000582552 80 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 AC104996.3-201ENST00000590718 94 ntBASIC1.98□□□□□ -2.09
PCDHGA11Q9Y5H2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-957P-201ENST00000363652 99 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNA5SP508-201ENST00000411327 119 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 Z98742.3-201ENST00000418637 326 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU7-21P-201ENST00000459430 62 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-75P-201ENST00000515944 104 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 Y_RNA.660-201ENST00000516002 120 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-557P-201ENST00000516842 110 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 AC023827.1-201ENST00000569247 97 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR3064-201ENST00000581130 66 ntBASIC1.97□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.491-201ENST00000384417 107 ntBASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-994P-201ENST00000410507 111 ntBASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 AC138907.6-201ENST00000568401 126 ntBASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 AC138869.1-201ENST00000568623 124 ntBASIC1.96□□□□□ -2.1
PCDHGA11Q9Y5H2 SNORA63.2-201ENST00000362603 126 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-910P-201ENST00000390844 107 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 AL450471.1-201ENST00000447509 127 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 FGF7P7-201ENST00000514120 227 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 MIR4676-201ENST00000583078 72 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 RNA5SP292-201ENST00000390974 118 ntBASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 MIR938-201ENST00000401216 83 ntBASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 MIR4513-201ENST00000581077 86 ntBASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-686P-201ENST00000364839 107 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 MIR518E-201ENST00000385252 88 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 AC015818.7-201ENST00000428754 109 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 AC097635.1-201ENST00000450678 155 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU7-40P-201ENST00000516397 64 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 AC027335.2-201ENST00000624030 375 ntBASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHGA11Q9Y5H2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-132P-201ENST00000383863 107 ntBASIC1.92□□□□□ -2.1
PCDHGA11Q9Y5H2 AC145423.2-201ENST00000610631 239 ntBASIC1.92□□□□□ -2.1
PCDHGA11Q9Y5H2 U7.4-201ENST00000614961 63 ntBASIC1.92□□□□□ -2.1
PCDHGA11Q9Y5H2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
PCDHGA11Q9Y5H2 MIRLET7F1-201ENST00000362202 87 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-478P-201ENST00000363904 110 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.264-201ENST00000364665 102 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-977P-201ENST00000516411 103 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 RNU6-448P-201ENST00000517052 107 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 SNORA70.22-201ENST00000517160 124 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 TRDV1-202ENST00000621643 102 ntBASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA11Q9Y5H2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-535P-201ENST00000384722 107 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 SNORD79.1-201ENST00000516069 84 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
PCDHGA11Q9Y5H2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR1-1-201ENST00000362147 71 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR599-201ENST00000385069 95 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 AC073261.1-201ENST00000429409 121 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 AC067940.1-201ENST00000458411 300 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
PCDHGA11Q9Y5H2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 MIRLET7A1-201ENST00000362295 80 ntBASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-161P-201ENST00000363051 106 ntBASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR100-201ENST00000385259 80 ntBASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 SNORD77.2-201ENST00000391045 68 ntBASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms