Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RN7SKP88-201ENST00000516847 250 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 MIR4500-201ENST00000579472 76 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 7SK.8-201ENST00000612110 250 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 7SK.11-201ENST00000615477 250 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 7SK.13-201ENST00000622040 250 ntBASIC1.59□□□□□ -2.15
SIT1Q9Y3P8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
SIT1Q9Y3P8 SNORD113.3-201ENST00000364630 78 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 SNORD114-22-201ENST00000365423 72 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.540-201ENST00000384638 111 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 RNA5SP338-201ENST00000410495 85 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 RNA5SP489-201ENST00000410986 109 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 RNU6-592P-201ENST00000411333 103 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 AL161932.1-201ENST00000437408 146 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 AC048334.1-201ENST00000477975 159 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 MIR4491-201ENST00000581087 68 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 AC020891.4-201ENST00000605745 93 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 MIR8066-201ENST00000617280 78 ntBASIC1.58□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.219-201ENST00000364232 113 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 RNU1-36P-201ENST00000365130 165 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 AC022137.1-201ENST00000483735 151 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 RNU6-850P-201ENST00000516934 103 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 AP003327.1-201ENST00000529684 127 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 uc_338.20-201ENST00000621563 178 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 AC025521.1-201ENST00000621624 286 ntBASIC1.57□□□□□ -2.16
SIT1Q9Y3P8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 RNU4-58P-201ENST00000363192 141 ntBASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 RNU6-979P-201ENST00000383896 107 ntBASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 RNA5SP480-201ENST00000516840 109 ntBASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 AC036111.3-201ENST00000526389 112 ntBASIC1.56□□□□□ -2.16
SIT1Q9Y3P8 RNU6-633P-201ENST00000362612 103 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 RNU6-53P-201ENST00000365367 106 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 RNU6-573P-201ENST00000383938 106 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 SNORD93-201ENST00000408813 74 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 RNU4-83P-201ENST00000410863 133 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.55□□□□□ -2.16
SIT1Q9Y3P8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.57-201ENST00000362806 113 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 RNY1P4-201ENST00000384595 115 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 SNORD111-201ENST00000408139 94 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.609-201ENST00000410669 89 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 RNU7-185P-201ENST00000459215 60 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 RNU7-171P-201ENST00000459581 62 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.685-201ENST00000516532 108 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 RNU6-267P-201ENST00000516714 103 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 MIR5588-201ENST00000581890 63 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 AC106800.4-201ENST00000614905 153 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 MIR1245B-201ENST00000636115 69 ntBASIC1.54□□□□□ -2.16
SIT1Q9Y3P8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 RNU6-509P-201ENST00000363519 107 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 RNU6-242P-201ENST00000384359 107 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 SNORA80D-201ENST00000384488 135 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 RNU6-1275P-201ENST00000391087 107 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 AL591704.2-201ENST00000421658 181 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 RNU7-21P-201ENST00000459430 62 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
SIT1Q9Y3P8 Y_RNA.73-201ENST00000362910 113 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 RNU6-1276P-201ENST00000365372 104 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 SUMO2P12-201ENST00000405924 140 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 BX276092.1-201ENST00000427368 251 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 RNU6-531P-201ENST00000516694 104 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 RNU6-765P-201ENST00000516916 99 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 AC012493.3-201ENST00000604494 112 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 MIR3202-2-201ENST00000635980 79 ntBASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
SIT1Q9Y3P8 RNU6-934P-201ENST00000365154 107 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 SNORD78.1-201ENST00000390866 65 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 MIR1257-201ENST00000408490 117 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 snoU13.21-201ENST00000459368 105 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 SNORA25.16-201ENST00000516741 121 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 RNA5SP364-201ENST00000516938 78 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 AC023934.1-201ENST00000574529 2389 ntBASIC1.51□□□□□ -2.17
SIT1Q9Y3P8 Y_RNA.426-201ENST00000384068 113 ntBASIC1.5□□□□□ -2.17
SIT1Q9Y3P8 AC087499.7-201ENST00000441958 109 ntBASIC1.5□□□□□ -2.17
SIT1Q9Y3P8 Y_RNA.648-201ENST00000459455 110 ntBASIC1.5□□□□□ -2.17
SIT1Q9Y3P8 SNORD79.1-201ENST00000516069 84 ntBASIC1.5□□□□□ -2.17
SIT1Q9Y3P8 MIR6082-201ENST00000613604 109 ntBASIC1.5□□□□□ -2.17
SIT1Q9Y3P8 SNORD36A-201ENST00000362874 73 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 MIR125B2-201ENST00000385128 89 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 MIR519A1-201ENST00000385257 85 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 RNU7-90P-201ENST00000459216 62 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 MIR548BB-201ENST00000626714 66 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 AC006160.2-201ENST00000637708 154 ntBASIC1.49□□□□□ -2.17
SIT1Q9Y3P8 RNU6-1254P-201ENST00000391266 104 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 235.1 ms