Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 MIR548I2-201ENST00000408348 149 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 AC244250.2-201ENST00000418731 148 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 RNU7-195P-201ENST00000458793 62 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 RNU7-13P-201ENST00000516413 62 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 AC138907.4-201ENST00000570107 226 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 MIR4308-201ENST00000580634 81 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.55□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 RNY4P28-201ENST00000365281 93 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 SNORD63B-201ENST00000411005 70 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 RNU7-164P-201ENST00000459221 62 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 MTND1P19-201ENST00000511780 315 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 RNU7-123P-201ENST00000515911 60 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 MTND5P40-201ENST00000559945 246 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 AC021443.1-201ENST00000604478 211 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 MIR6507-201ENST00000613630 70 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 AP001362.1-201ENST00000625165 124 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
NUP50Q9UKX7 MIR655-201ENST00000362159 97 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 MTCYBP6-201ENST00000441810 138 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 RNU7-74P-201ENST00000459104 62 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 MTATP8P1-201ENST00000467115 207 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 AC096720.1-201ENST00000604441 183 ntBASIC-0.57□□□□□ -2.5
NUP50Q9UKX7 RNU6-238P-201ENST00000363313 106 ntBASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 RNU1-141P-201ENST00000364623 158 ntBASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 MIR4788-201ENST00000639104 80 ntBASIC-0.58□□□□□ -2.5
NUP50Q9UKX7 RNU6-170P-201ENST00000362832 104 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 U8.6-201ENST00000364939 135 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 RNU6-524P-201ENST00000384270 107 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 RNU6-768P-201ENST00000384683 107 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 snoU13.11-201ENST00000459219 104 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 RNU7-2P-201ENST00000516096 62 ntBASIC-0.59□□□□□ -2.5
NUP50Q9UKX7 RNA5SP205-201ENST00000364653 136 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 RNA5SP67-201ENST00000516422 131 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 MIR548AG2-201ENST00000581228 64 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 MIR4473-201ENST00000583731 91 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 MIR4263-201ENST00000584745 83 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 U6.106-201ENST00000636360 105 ntBASIC-0.6□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 MT-TQ-201ENST00000387372 72 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 SNORD77B-201ENST00000391112 67 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 RNU7-188P-201ENST00000517063 64 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 MIR3149-201ENST00000584629 83 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 AC009779.6-201ENST00000603972 165 ntBASIC-0.61□□□□□ -2.51
NUP50Q9UKX7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 RNU6-818P-201ENST00000364837 108 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 RNU6-571P-201ENST00000384128 107 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 RNU2-38P-201ENST00000410856 79 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 AC093423.1-201ENST00000440817 142 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 RNU7-106P-201ENST00000459514 67 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 RNU6-138P-201ENST00000515952 107 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 MIR376B-201ENST00000614515 100 ntBASIC-0.62□□□□□ -2.51
NUP50Q9UKX7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 MIR519E-201ENST00000385075 84 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 AL603914.1-201ENST00000401964 204 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 MTATP6P21-201ENST00000440681 189 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 MIR3681-201ENST00000580089 72 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 AL590491.3-201ENST00000610731 82 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 AC069503.3-201ENST00000618674 145 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
NUP50Q9UKX7 RNU6-616P-201ENST00000384353 107 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 MIR181B2-201ENST00000385004 89 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 MIR548F4-201ENST00000408515 105 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 MIR548H3-201ENST00000408771 118 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 RNU6-735P-201ENST00000410612 107 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 IGKV1-22-201ENST00000524313 326 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 MIR548AX-201ENST00000580117 73 ntBASIC-0.64□□□□□ -2.51
NUP50Q9UKX7 SNORD115-35-201ENST00000365122 82 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 MIR617-201ENST00000385030 97 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 MTND2P23-201ENST00000422990 651 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.65□□□□□ -2.51
NUP50Q9UKX7 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms