Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 MIR516A2-201ENST00000384888 90 ntBASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 MIR516A1-201ENST00000385033 90 ntBASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SALL4Q9UJQ4 MIR101-2-201ENST00000362195 79 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 SNORD113.3-201ENST00000364630 78 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 MIR1257-201ENST00000408490 117 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 RNU7-185P-201ENST00000459215 60 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 RN7SKP88-201ENST00000516847 250 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 7SK.8-201ENST00000612110 250 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 7SK.11-201ENST00000615477 250 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 7SK.13-201ENST00000622040 250 ntBASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SALL4Q9UJQ4 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 AC048334.1-201ENST00000477975 159 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
SALL4Q9UJQ4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SALL4Q9UJQ4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 SNORD36A-201ENST00000362874 73 ntBASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 RNU6-934P-201ENST00000365154 107 ntBASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 RNU6-65P-201ENST00000516332 98 ntBASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 MIR4536-1-201ENST00000583537 88 ntBASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 RNU7-10P-201ENST00000607194 63 ntBASIC1.9□□□□□ -2.11
SALL4Q9UJQ4 MIR635-201ENST00000384830 98 ntBASIC1.89□□□□□ -2.11
SALL4Q9UJQ4 RNU7-85P-201ENST00000458851 63 ntBASIC1.89□□□□□ -2.11
SALL4Q9UJQ4 AC140658.3-201ENST00000567603 271 ntBASIC1.89□□□□□ -2.11
SALL4Q9UJQ4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
SALL4Q9UJQ4 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 SNORD83.1-201ENST00000411362 77 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 snoU13.11-201ENST00000459219 104 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 RNU7-153P-201ENST00000516455 62 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 AC019288.1-201ENST00000557918 224 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 MIR548H5-201ENST00000580314 60 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 AC013244.2-201ENST00000603396 103 ntBASIC1.88□□□□□ -2.11
SALL4Q9UJQ4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 SNORD111-201ENST00000408139 94 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 SNORD100-201ENST00000408573 76 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 SNORD63B-201ENST00000411005 70 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 RPS27P16-201ENST00000425758 201 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 snoU13.21-201ENST00000459368 105 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 RNU7-106P-201ENST00000459514 67 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 SNORA31.2-201ENST00000516019 134 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 SNORA25.13-201ENST00000516395 103 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 AC036111.3-201ENST00000526389 112 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 MIR4662A-201ENST00000637499 67 ntBASIC1.87□□□□□ -2.11
SALL4Q9UJQ4 RNU6-466P-201ENST00000391224 103 ntBASIC1.86□□□□□ -2.11
SALL4Q9UJQ4 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
SALL4Q9UJQ4 MIR6082-201ENST00000613604 109 ntBASIC1.86□□□□□ -2.11
SALL4Q9UJQ4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.85□□□□□ -2.11
SALL4Q9UJQ4 AL591704.2-201ENST00000421658 181 ntBASIC1.85□□□□□ -2.11
SALL4Q9UJQ4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.85□□□□□ -2.11
SALL4Q9UJQ4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SALL4Q9UJQ4 RNU6-811P-201ENST00000384069 107 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 SNORA75.2-201ENST00000391138 150 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 SNORA75.3-201ENST00000391231 150 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 MIR4771-2-201ENST00000577758 74 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 MIR4771-1-201ENST00000582617 74 ntBASIC1.84□□□□□ -2.11
SALL4Q9UJQ4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SALL4Q9UJQ4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 MIR125B2-201ENST00000385128 89 ntBASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 AC106800.4-201ENST00000614905 153 ntBASIC1.83□□□□□ -2.12
SALL4Q9UJQ4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.94-201ENST00000363068 106 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 SNORA80D-201ENST00000384488 135 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 TRAJ51-201ENST00000504127 63 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 RNU6-765P-201ENST00000516916 99 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 MIR4796-201ENST00000580742 81 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 MIR4712-201ENST00000583750 82 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 SNORD92-201ENST00000585078 85 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
SALL4Q9UJQ4 RNU6-1296P-201ENST00000383879 107 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 MIR548U-201ENST00000390728 81 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 RNU6-129P-201ENST00000391022 107 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 RPS26P5-201ENST00000418544 335 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 RNU7-156P-201ENST00000517214 74 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 AC023827.1-201ENST00000569247 97 ntBASIC1.81□□□□□ -2.12
SALL4Q9UJQ4 RNU7-195P-201ENST00000458793 62 ntBASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.8□□□□□ -2.12
SALL4Q9UJQ4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms