Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 RNU6-1290P-201ENST00000362957 109 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.273-201ENST00000364703 102 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.281-201ENST00000364774 94 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 RNU6-409P-201ENST00000384114 104 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 MIR573-201ENST00000384964 99 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.76□□□□□ -2.29
SIX4Q9UIU6 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 RNU6-765P-201ENST00000516916 99 ntBASIC0.76□□□□□ -2.29
SIX4Q9UIU6 RNU6-834P-201ENST00000362367 110 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 RNU4-58P-201ENST00000363192 141 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 U8.6-201ENST00000364939 135 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.309-201ENST00000365046 111 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 MIR1912-201ENST00000410389 80 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 AC068339.1-201ENST00000526965 141 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 AC011195.1-201ENST00000578177 177 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
SIX4Q9UIU6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SIX4Q9UIU6 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.74□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 RNU6-1006P-201ENST00000516998 103 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 RNU6-448P-201ENST00000517052 107 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 MIR4500-201ENST00000579472 76 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 AL512310.12-203ENST00000640543 90 ntBASIC0.74□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.247-201ENST00000364500 92 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 RNU6-1107P-201ENST00000364817 104 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 RNU6-1201P-201ENST00000384227 107 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 RNU6-291P-201ENST00000384720 107 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.629-201ENST00000411368 105 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.73□□□□□ -2.29
SIX4Q9UIU6 RNU6-589P-201ENST00000516485 107 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 MIR5009-201ENST00000578736 100 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 MIR548AI-201ENST00000579940 88 ntBASIC0.73□□□□□ -2.29
SIX4Q9UIU6 AC002350.1-201ENST00000490759 375 ntBASIC0.72□□□□□ -2.29
SIX4Q9UIU6 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
SIX4Q9UIU6 RNU6-1194P-201ENST00000516208 104 ntBASIC0.72□□□□□ -2.29
SIX4Q9UIU6 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
SIX4Q9UIU6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.72□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.323-201ENST00000365157 109 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 MIR577-201ENST00000385196 96 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 SNORD100-201ENST00000408573 76 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 RNU6-412P-201ENST00000516434 106 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 RNU6-1018P-201ENST00000516577 106 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
SIX4Q9UIU6 MIR101-2-201ENST00000362195 79 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 RNU6-1325P-201ENST00000364905 105 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 RNU6-1014P-201ENST00000383940 103 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 RNY1P8-201ENST00000383970 114 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 AC022709.1-201ENST00000615967 87 ntBASIC0.7□□□□□ -2.3
SIX4Q9UIU6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
SIX4Q9UIU6 RNA5SP245-201ENST00000364239 121 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 MIR518E-201ENST00000385252 88 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 RNA5SP222-201ENST00000411039 105 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 SNORA31.14-201ENST00000516728 116 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.709-201ENST00000516952 92 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 MIR4694-201ENST00000578534 80 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 AL078603.1-201ENST00000603824 313 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 AL442128.1-201ENST00000615151 90 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 uc_338.16-201ENST00000621804 95 ntBASIC0.69□□□□□ -2.3
SIX4Q9UIU6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SIX4Q9UIU6 MIR18A-201ENST00000362310 71 ntBASIC0.68□□□□□ -2.3
SIX4Q9UIU6 SNORD20-201ENST00000384550 80 ntBASIC0.68□□□□□ -2.3
SIX4Q9UIU6 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
SIX4Q9UIU6 SNRPGP12-201ENST00000449481 213 ntBASIC0.68□□□□□ -2.3
SIX4Q9UIU6 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
SIX4Q9UIU6 RNY3P2-201ENST00000362918 102 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNU6-832P-201ENST00000363319 107 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 SNORD38.1-201ENST00000363863 68 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNU6-215P-201ENST00000365169 102 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.355-201ENST00000365462 98 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 SNORD38.2-201ENST00000384470 69 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 MIR644A-201ENST00000385262 94 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNY4P18-201ENST00000391107 89 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 SNORA19.1-201ENST00000410656 129 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNA5SP436-201ENST00000516020 115 ntBASIC0.67□□□□□ -2.3
SIX4Q9UIU6 RNA5SP220-201ENST00000516298 104 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms