Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC097635.1-201ENST00000450678 155 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 RNU2-60P-201ENST00000517290 128 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 MIR548AD-201ENST00000584780 82 ntBASIC-0.18□□□□□ -2.44
CLCF1Q9UBD9 RNU6-694P-201ENST00000364071 147 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 TRAJ51-201ENST00000504127 63 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 AL670379.3-201ENST00000605040 251 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 AP001362.1-201ENST00000625165 124 ntBASIC-0.19□□□□□ -2.44
CLCF1Q9UBD9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
CLCF1Q9UBD9 SNORD37.2-201ENST00000391075 66 ntBASIC-0.2□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.2□□□□□ -2.44
CLCF1Q9UBD9 uc_338.28-201ENST00000612082 187 ntBASIC-0.2□□□□□ -2.44
CLCF1Q9UBD9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNU6-865P-201ENST00000364772 107 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 AL603914.1-201ENST00000401964 204 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNU7-165P-201ENST00000458864 60 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 AC009779.6-201ENST00000603972 165 ntBASIC-0.21□□□□□ -2.44
CLCF1Q9UBD9 RNU6-161P-201ENST00000363051 106 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 BX276092.1-201ENST00000427368 251 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 RNU7-121P-201ENST00000516604 62 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 RNA5SP285-201ENST00000516619 119 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 MIR4677-201ENST00000584153 80 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 MIR3925-201ENST00000584674 77 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 AC072026.1-201ENST00000605023 201 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 MIR6759-201ENST00000638110 65 ntBASIC-0.22□□□□□ -2.44
CLCF1Q9UBD9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 RNU6-309P-201ENST00000364573 106 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 RNU6-196P-201ENST00000384315 107 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 MIR519A1-201ENST00000385257 85 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 AC006210.1-201ENST00000424882 111 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 AL137067.1-201ENST00000615933 120 ntBASIC-0.23□□□□□ -2.45
CLCF1Q9UBD9 SNORA75.1-201ENST00000391130 148 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 SNORD110-201ENST00000408189 75 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 MTND3P2-201ENST00000438452 342 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 RNU7-74P-201ENST00000459104 62 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 RNY4P20-201ENST00000516678 93 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 AC022559.1-201ENST00000520905 205 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 MIR4503-201ENST00000582187 83 ntBASIC-0.24□□□□□ -2.45
CLCF1Q9UBD9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU6-508P-201ENST00000363231 103 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 SNORD115-35-201ENST00000365122 82 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU6V-201ENST00000384105 107 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU6-616P-201ENST00000384353 107 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 SNORD63B-201ENST00000411005 70 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU7-13P-201ENST00000516413 62 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 RNU6-180P-201ENST00000516697 61 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 AC130289.1-201ENST00000577321 73 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 MIR3658-201ENST00000636291 56 ntBASIC-0.25□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 RNU7-195P-201ENST00000458793 62 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 NAMPTP3-201ENST00000569273 224 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 MIR376B-201ENST00000614515 100 ntBASIC-0.26□□□□□ -2.45
CLCF1Q9UBD9 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 RNA5SP484-201ENST00000458857 111 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 MIR3920-201ENST00000581751 86 ntBASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.27□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 RNY1P11-201ENST00000363759 113 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 RNU6-46P-201ENST00000383860 107 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 CR383656.4-201ENST00000546909 122 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 AC084368.1-201ENST00000620935 65 ntBASIC-0.28□□□□□ -2.45
CLCF1Q9UBD9 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.29□□□□□ -2.46
CLCF1Q9UBD9 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms