Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU7-104P-201ENST00000459398 79 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 MIR3920-201ENST00000581751 86 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RN7SL660P-201ENST00000614852 299 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 AC087741.2-201ENST00000619415 172 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RNU6-643P-201ENST00000384018 107 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 MTCYBP6-201ENST00000441810 138 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 RNU6-175P-201ENST00000516896 107 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 AL137067.1-201ENST00000615933 120 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 AL365265.1-201ENST00000621045 234 ntBASIC-0.23□□□□□ -2.45
CCDC88CQ9P219 MIR20A-201ENST00000362279 71 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 RNU6-664P-201ENST00000362381 107 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 SNORD114-28-201ENST00000363610 72 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 SNORD58.1-201ENST00000391313 66 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 AC093423.1-201ENST00000440817 142 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 RNU7-195P-201ENST00000458793 62 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 MIR4308-201ENST00000580634 81 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 RNU7-10P-201ENST00000607194 63 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.24□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 RNU1-141P-201ENST00000364623 158 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR604-201ENST00000384880 94 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 AC097635.1-201ENST00000450678 155 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 RNU7-106P-201ENST00000459514 67 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MTND5P40-201ENST00000559945 246 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR548AE2-201ENST00000583456 67 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR3149-201ENST00000584629 83 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 RNU4-84P-201ENST00000364200 139 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 SNORD18B-201ENST00000365659 72 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 RNU6-811P-201ENST00000384069 107 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR519E-201ENST00000385075 84 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MTND1P19-201ENST00000511780 315 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR548AX-201ENST00000580117 73 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 MIR4436A-201ENST00000585278 85 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 AC108081.1-201ENST00000604358 221 ntBASIC-0.25□□□□□ -2.45
CCDC88CQ9P219 RNU6-639P-201ENST00000384074 107 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU4-69P-201ENST00000410677 143 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 SNORD63B-201ENST00000411005 70 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU7-2P-201ENST00000516096 62 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 AL670379.3-201ENST00000605040 251 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 FTX_2.1-201ENST00000618816 94 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 MT-TY-201ENST00000387409 66 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU6-918P-201ENST00000391219 106 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU2-38P-201ENST00000410856 79 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNY4P20-201ENST00000516678 93 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 RNU7-188P-201ENST00000517063 64 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 MIR4473-201ENST00000583731 91 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 MIR8062-201ENST00000621515 85 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 U6.100-201ENST00000636230 99 ntBASIC-0.26□□□□□ -2.45
CCDC88CQ9P219 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 MIR409-201ENST00000362237 79 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 AL603914.1-201ENST00000401964 204 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNA5SP266-201ENST00000410273 108 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNU6-719P-201ENST00000516671 104 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 MIR3646-201ENST00000578301 84 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 MIR548AG2-201ENST00000581228 64 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 U4.1-201ENST00000620349 87 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 MIR6514-201ENST00000622549 70 ntBASIC-0.27□□□□□ -2.45
CCDC88CQ9P219 RNA5SP403-201ENST00000363598 108 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU6-957P-201ENST00000363652 99 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 SNORA32-201ENST00000384072 121 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU6-571P-201ENST00000384128 107 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 MIR599-201ENST00000385069 95 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 snoU13.11-201ENST00000459219 104 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 MIR4280-201ENST00000582178 76 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms