Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.09□□□□□ -2.23
NCKIPSDQ9NZQ3 AC106800.4-201ENST00000614905 153 ntBASIC1.09□□□□□ -2.23
NCKIPSDQ9NZQ3 AP001362.1-201ENST00000625165 124 ntBASIC1.09□□□□□ -2.23
NCKIPSDQ9NZQ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
NCKIPSDQ9NZQ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 RNY1P2-201ENST00000364820 117 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR18B-201ENST00000454574 71 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR376B-201ENST00000614515 100 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 AC012531.4-201ENST00000616509 177 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 AC105081.1-201ENST00000617727 106 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR34C-201ENST00000384831 77 ntBASIC1.07□□□□□ -2.24
NCKIPSDQ9NZQ3 U8.15-201ENST00000390947 134 ntBASIC1.07□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD83.1-201ENST00000411362 77 ntBASIC1.07□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-972P-201ENST00000391208 107 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR942-201ENST00000401111 86 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-795P-201ENST00000516323 103 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR4777-201ENST00000583710 86 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-90P-201ENST00000606352 106 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 MALAT1.1-201ENST00000618249 95 ntBASIC1.06□□□□□ -2.24
NCKIPSDQ9NZQ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR488-201ENST00000365739 83 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR548G-201ENST00000408442 89 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 AC091304.10-201ENST00000641554 121 ntBASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
NCKIPSDQ9NZQ3 HSBP1P2-201ENST00000299671 229 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-294P-201ENST00000364999 102 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-813P-201ENST00000384691 107 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-644P-201ENST00000391155 98 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD111-201ENST00000408139 94 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-887P-201ENST00000410660 100 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 AC109327.2-201ENST00000448339 378 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU7-61P-201ENST00000515897 61 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-844P-201ENST00000517175 102 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.04□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-49P-201ENST00000384256 107 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 RNU6-994P-201ENST00000410507 111 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 MTND5P40-201ENST00000559945 246 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 AC020891.4-201ENST00000605745 93 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
NCKIPSDQ9NZQ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.25
NCKIPSDQ9NZQ3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR1302-4-201ENST00000408701 150 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 SPINT5P-201ENST00000448174 155 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 AC067940.1-201ENST00000458411 300 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 SNORA72.7-201ENST00000516349 94 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4771-2-201ENST00000577758 74 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4771-1-201ENST00000582617 74 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 U7.3-201ENST00000616123 62 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR4679-1-201ENST00000637619 75 ntBASIC1.02□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 SNORD116-10-201ENST00000363791 102 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-934P-201ENST00000365154 107 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-480P-201ENST00000384332 107 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU7-185P-201ENST00000459215 60 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 MIR548Z-201ENST00000584743 97 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU6-86P-201ENST00000606534 107 ntBASIC1.01□□□□□ -2.25
NCKIPSDQ9NZQ3 AC023934.1-201ENST00000574529 2389 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 RNA5SP133-201ENST00000363368 119 ntBASIC1□□□□□ -2.25
NCKIPSDQ9NZQ3 RNU1-36P-201ENST00000365130 165 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms