Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 RNY1P7-201ENST00000384743 110 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 Y_RNA.588-201ENST00000391254 102 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 SNORD93-201ENST00000408813 74 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 SNORD83.1-201ENST00000411362 77 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 SPINT5P-201ENST00000448174 155 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDND1Q9NY35 AC090897.1-201ENST00000580909 226 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 U7.3-201ENST00000616123 62 ntBASIC1.52□□□□□ -2.17
CLDND1Q9NY35 Y_RNA.119-201ENST00000363301 96 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 Y_RNA.173-201ENST00000363776 113 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 RNU6-813P-201ENST00000384691 107 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 SNORD111-201ENST00000408139 94 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 RNU7-185P-201ENST00000459215 60 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 MTND5P40-201ENST00000559945 246 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 AC023827.1-201ENST00000569247 97 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 MIR4491-201ENST00000581087 68 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 RNU6-86P-201ENST00000606534 107 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 AC023934.1-201ENST00000574529 2389 ntBASIC1.51□□□□□ -2.17
CLDND1Q9NY35 RNU6-1244P-201ENST00000363614 108 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNU6-934P-201ENST00000365154 107 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 Y_RNA.567-201ENST00000384736 106 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNU6-972P-201ENST00000391208 107 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNU6-887P-201ENST00000410660 100 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 MIR4500-201ENST00000579472 76 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 PVT1_3.1-201ENST00000620853 95 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 MIR4679-1-201ENST00000637619 75 ntBASIC1.5□□□□□ -2.17
CLDND1Q9NY35 RNU6-294P-201ENST00000364999 102 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 MIR1257-201ENST00000408490 117 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 RNU6-162P-201ENST00000516228 103 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 RNU6-844P-201ENST00000517175 102 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.49□□□□□ -2.17
CLDND1Q9NY35 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLDND1Q9NY35 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CLDND1Q9NY35 SNORA25.16-201ENST00000516741 121 ntBASIC1.48□□□□□ -2.17
CLDND1Q9NY35 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 MIR598-201ENST00000384868 97 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 AC015818.7-201ENST00000428754 109 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 AC087499.7-201ENST00000441958 109 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 SNRPGP12-201ENST00000449481 213 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 RPS29P1-201ENST00000465274 159 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 AC103810.7-201ENST00000607821 91 ntBASIC1.47□□□□□ -2.17
CLDND1Q9NY35 RNU6-403P-201ENST00000363163 104 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 SNORD114-27-201ENST00000363766 70 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU4-83P-201ENST00000410863 133 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RPS26P5-201ENST00000418544 335 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU7-40P-201ENST00000516397 64 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU6-531P-201ENST00000516694 104 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU6-1223P-201ENST00000517124 104 ntBASIC1.46□□□□□ -2.18
CLDND1Q9NY35 RNU4-58P-201ENST00000363192 141 ntBASIC1.45□□□□□ -2.18
CLDND1Q9NY35 SNORA72.6-201ENST00000384520 129 ntBASIC1.45□□□□□ -2.18
CLDND1Q9NY35 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
CLDND1Q9NY35 AC020891.4-201ENST00000605745 93 ntBASIC1.45□□□□□ -2.18
CLDND1Q9NY35 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 SNORD58A-201ENST00000383875 65 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 RNU6-571P-201ENST00000384128 107 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 MIR125B2-201ENST00000385128 89 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 BX276092.1-201ENST00000427368 251 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.44□□□□□ -2.18
CLDND1Q9NY35 RNU6-369P-201ENST00000362515 102 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 SNORD116-10-201ENST00000363791 102 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 Y_RNA.190-201ENST00000363964 101 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 SNORA25-201ENST00000384384 134 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 Y_RNA.558-201ENST00000384685 113 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 AC002429.1-201ENST00000437672 148 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 RNU6-850P-201ENST00000516934 103 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 AC026421.1-201ENST00000519101 163 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 MIR151B-201ENST00000584249 96 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 MIR8066-201ENST00000617280 78 ntBASIC1.43□□□□□ -2.18
CLDND1Q9NY35 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CLDND1Q9NY35 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLDND1Q9NY35 Y_RNA.13-201ENST00000362403 112 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 RNU6-1125P-201ENST00000363601 107 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 RNU6-480P-201ENST00000384332 107 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 MIR181B2-201ENST00000385004 89 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 RNU6-994P-201ENST00000410507 111 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 RNU6-1194P-201ENST00000516208 104 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 MIR4676-201ENST00000583078 72 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
CLDND1Q9NY35 Y_RNA.205-201ENST00000364128 113 ntBASIC1.41□□□□□ -2.18
CLDND1Q9NY35 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
CLDND1Q9NY35 Y_RNA.42-201ENST00000362660 108 ntBASIC1.4□□□□□ -2.19
CLDND1Q9NY35 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLDND1Q9NY35 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CLDND1Q9NY35 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
CLDND1Q9NY35 RNU6-765P-201ENST00000516916 99 ntBASIC1.4□□□□□ -2.19
CLDND1Q9NY35 RNU7-156P-201ENST00000517214 74 ntBASIC1.4□□□□□ -2.19
CLDND1Q9NY35 AC013244.2-201ENST00000603396 103 ntBASIC1.4□□□□□ -2.19
CLDND1Q9NY35 Y_RNA.57-201ENST00000362806 113 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms