Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
DDX4Q9NQI0 MT-TI-201ENST00000387365 69 ntBASIC0.63□□□□□ -2.31
DDX4Q9NQI0 AL603908.1-201ENST00000406098 201 ntBASIC0.63□□□□□ -2.31
DDX4Q9NQI0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.712-201ENST00000517011 92 ntBASIC0.63□□□□□ -2.31
DDX4Q9NQI0 U6.95-201ENST00000636931 70 ntBASIC0.63□□□□□ -2.31
DDX4Q9NQI0 RNU6-1234P-201ENST00000516877 103 ntBASIC0.62□□□□□ -2.31
DDX4Q9NQI0 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
DDX4Q9NQI0 MIR3914-2-201ENST00000637339 95 ntBASIC0.62□□□□□ -2.31
DDX4Q9NQI0 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.218-201ENST00000364218 104 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.328-201ENST00000365208 113 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 SNORD116-14-201ENST00000383894 92 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 SNORD116-17-201ENST00000383929 92 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 SNORD116-15-201ENST00000384445 92 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 SNORD116-19-201ENST00000384729 92 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 SUMO1P3-201ENST00000439961 304 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.61□□□□□ -2.31
DDX4Q9NQI0 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 uc_338.16-201ENST00000621804 95 ntBASIC0.61□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.56-201ENST00000362798 112 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.71-201ENST00000362892 104 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.127-201ENST00000363386 109 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 RNU6-291P-201ENST00000384720 107 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 RNU7-107P-201ENST00000459121 61 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 RNU6-659P-201ENST00000516454 104 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 MIR548H5-201ENST00000580314 60 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
DDX4Q9NQI0 RNU6-81P-201ENST00000365608 104 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 SNORD38.2-201ENST00000384470 69 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.507-201ENST00000384500 99 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 RNU6-959P-201ENST00000384671 107 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 MIR193B-201ENST00000384907 83 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 RNU6-735P-201ENST00000410612 107 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 MTND5P34-201ENST00000568888 325 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.773-201ENST00000607168 90 ntBASIC0.59□□□□□ -2.31
DDX4Q9NQI0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 RNU4-67P-201ENST00000364569 141 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 AC008267.6-201ENST00000441664 139 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 RNU6-521P-201ENST00000516663 105 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 MIR1273G-201ENST00000577677 100 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 MIR4679-2-201ENST00000578358 77 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 MIR3678-201ENST00000578455 94 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
DDX4Q9NQI0 RNU6-363P-201ENST00000362895 105 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 RNA5SP457-201ENST00000363657 124 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 RPL39P34-201ENST00000477141 156 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 SNORA31.14-201ENST00000516728 116 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 MIR376B-201ENST00000614515 100 ntBASIC0.57□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 RNU6-1307P-201ENST00000391012 103 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 MIR548I2-201ENST00000408348 149 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.649-201ENST00000459077 103 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 RNU6-1018P-201ENST00000516577 106 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 MIR4500-201ENST00000579472 76 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 MIR1255B1-201ENST00000636325 63 ntBASIC0.56□□□□□ -2.32
DDX4Q9NQI0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.344-201ENST00000365381 112 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.362-201ENST00000365518 110 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 RNA5SP94-201ENST00000516917 108 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 AC138869.1-201ENST00000568623 124 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 AL162726.3-218ENST00000636401 95 ntBASIC0.55□□□□□ -2.32
DDX4Q9NQI0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.85-201ENST00000363014 111 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNU6-409P-201ENST00000384114 104 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNU6-571P-201ENST00000384128 107 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.563-201ENST00000384707 108 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 MIR548A3-201ENST00000385297 97 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNU6-1333P-201ENST00000516162 93 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 MIR4639-201ENST00000584938 69 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 AL670379.3-201ENST00000605040 251 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
DDX4Q9NQI0 RNU6-1313P-201ENST00000362622 102 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.155-201ENST00000363632 101 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.309-201ENST00000365046 111 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.525-201ENST00000384570 113 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 MIR635-201ENST00000384830 98 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 MIR34C-201ENST00000384831 77 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 MIR644A-201ENST00000385262 94 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 RNU6-679P-201ENST00000391003 106 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 AC007012.1-201ENST00000567192 175 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 MIR3910-1-201ENST00000580936 111 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 AC132825.6-201ENST00000638861 357 ntBASIC0.53□□□□□ -2.32
DDX4Q9NQI0 AL512310.12-203ENST00000640543 90 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms