Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU4-45P-201ENST00000365469 141 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 RNU6-448P-201ENST00000517052 107 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 AC068339.1-201ENST00000526965 141 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 U6.109-201ENST00000636749 87 ntBASIC1.07□□□□□ -2.24
VTA1Q9NP79 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 Y_RNA.119-201ENST00000363301 96 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 SNORA63.5-201ENST00000363548 123 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 Y_RNA.323-201ENST00000365157 109 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 SNORA72.6-201ENST00000384520 129 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
VTA1Q9NP79 MIR5009-201ENST00000578736 100 ntBASIC1.06□□□□□ -2.24
VTA1Q9NP79 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.06□□□□□ -2.24
VTA1Q9NP79 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
VTA1Q9NP79 Y_RNA.35-201ENST00000362601 101 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 Y_RNA.360-201ENST00000365512 102 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AC015818.7-201ENST00000428754 109 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AC087499.7-201ENST00000441958 109 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AL035470.1-201ENST00000622571 220 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 AL512310.12-203ENST00000640543 90 ntBASIC1.05□□□□□ -2.24
VTA1Q9NP79 Y_RNA.174-201ENST00000363781 105 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 Y_RNA.377-201ENST00000365644 108 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 MIR598-201ENST00000384868 97 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 SNORA7.5-201ENST00000410672 110 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.04□□□□□ -2.24
VTA1Q9NP79 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 AC096720.1-201ENST00000604441 183 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 MIR376B-201ENST00000614515 100 ntBASIC1.04□□□□□ -2.24
VTA1Q9NP79 HSBP1P2-201ENST00000299671 229 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 Y_RNA.549-201ENST00000384657 102 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 MIR573-201ENST00000384964 99 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 SNORD100-201ENST00000408573 76 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 RNU6-135P-201ENST00000516769 101 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 MIR4694-201ENST00000578534 80 ntBASIC1.03□□□□□ -2.24
VTA1Q9NP79 MIR101-2-201ENST00000362195 79 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 Y_RNA.56-201ENST00000362798 112 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 SNORD38.1-201ENST00000363863 68 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 RNU6-1107P-201ENST00000364817 104 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 U8.6-201ENST00000364939 135 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VTA1Q9NP79 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 RNU6-679P-201ENST00000391003 106 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 RNU6-589P-201ENST00000516485 107 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 RNU6-531P-201ENST00000516694 104 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 SNORA25.16-201ENST00000516741 121 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 MIR548H5-201ENST00000580314 60 ntBASIC1.02□□□□□ -2.25
VTA1Q9NP79 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.02□□□□□ -2.25
VTA1Q9NP79 Y_RNA.10-201ENST00000362371 110 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 RNU6-1290P-201ENST00000362957 109 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 Y_RNA.697-201ENST00000516776 113 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 MIR5000-201ENST00000577717 103 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
VTA1Q9NP79 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
VTA1Q9NP79 Y_RNA.205-201ENST00000364128 113 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 RNU6-571P-201ENST00000384128 107 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 Y_RNA.536-201ENST00000384621 113 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 MIR34C-201ENST00000384831 77 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
VTA1Q9NP79 AC002350.1-201ENST00000490759 375 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 Y_RNA.709-201ENST00000516952 92 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 MIR4500-201ENST00000579472 76 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 AL442128.1-201ENST00000615151 90 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 MIR6129-201ENST00000616087 109 ntBASIC1□□□□□ -2.25
VTA1Q9NP79 RNY3P2-201ENST00000362918 102 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 Y_RNA.78-201ENST00000362970 110 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 RNU6-1014P-201ENST00000383940 103 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 RNU6-1201P-201ENST00000384227 107 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 RNU6-110P-201ENST00000384508 104 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 RNU6-1307P-201ENST00000391012 103 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
VTA1Q9NP79 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 AC008608.1-201ENST00000603910 127 ntBASIC0.99□□□□□ -2.25
VTA1Q9NP79 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
VTA1Q9NP79 RNU6-1325P-201ENST00000364905 105 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 RNU6-1335P-201ENST00000365426 107 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 Y_RNA.374-201ENST00000365606 101 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 RNU6-1113P-201ENST00000384348 107 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 MIR605-201ENST00000385078 83 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 MIR1302-5-201ENST00000408164 150 ntBASIC0.98□□□□□ -2.25
VTA1Q9NP79 RNU4-36P-201ENST00000364294 144 ntBASIC0.97□□□□□ -2.25
VTA1Q9NP79 MIR4439-201ENST00000583746 80 ntBASIC0.97□□□□□ -2.25
VTA1Q9NP79 RNU6-90P-201ENST00000606352 106 ntBASIC0.97□□□□□ -2.25
VTA1Q9NP79 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 AL353813.1-201ENST00000440700 253 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 RNU6-1006P-201ENST00000516998 103 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 MTND5P40-201ENST00000559945 246 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
VTA1Q9NP79 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
VTA1Q9NP79 RNU6-832P-201ENST00000363319 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms