Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MIR1827-201ENST00000408549 66 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 RNU6-1313P-201ENST00000362622 102 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 SNORA63.4-201ENST00000362763 126 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 RNU6-106P-201ENST00000384405 107 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 RNU1-119P-201ENST00000391122 165 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 SNORD83.1-201ENST00000411362 77 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 MTND5P40-201ENST00000559945 246 ntBASIC0.72□□□□□ -2.29
PCNX3Q9H6A9 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 AL078603.1-201ENST00000603824 313 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 RNU6-939P-201ENST00000384634 107 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 RNY4P18-201ENST00000391107 89 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 AC019288.1-201ENST00000557918 224 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 RNU6-90P-201ENST00000606352 106 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 AL035470.1-201ENST00000622571 220 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 MIR2052-201ENST00000636055 55 ntBASIC0.71□□□□□ -2.3
PCNX3Q9H6A9 MIR101-2-201ENST00000362195 79 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 MIR26B-201ENST00000362251 77 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 RNY1P2-201ENST00000364820 117 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 MIR635-201ENST00000384830 98 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.7□□□□□ -2.3
PCNX3Q9H6A9 SNORD45B-201ENST00000364617 72 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 RNU6-215P-201ENST00000365169 102 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 RNU6-1201P-201ENST00000384227 107 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 RNU6-616P-201ENST00000384353 107 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 RNU6-554P-201ENST00000410466 106 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.601-201ENST00000410500 113 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 AL031737.1-201ENST00000450125 223 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 AC067940.1-201ENST00000458411 300 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 MIR6779-201ENST00000617283 64 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.10-201ENST00000362371 110 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 RNY3P2-201ENST00000362918 102 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.78-201ENST00000362970 110 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 SNORD124-201ENST00000459577 104 ntBASIC0.69□□□□□ -2.3
PCNX3Q9H6A9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 SNORD38.1-201ENST00000363863 68 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 AL136317.1-201ENST00000612653 226 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.818-201ENST00000618813 71 ntBASIC0.68□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 AC015818.7-201ENST00000428754 109 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 AC087499.7-201ENST00000441958 109 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 AC002350.1-201ENST00000490759 375 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RNU6-531P-201ENST00000516694 104 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 MIR3613-201ENST00000579844 87 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 MIR6082-201ENST00000613604 109 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 AP001362.1-201ENST00000625165 124 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 SNORA72.6-201ENST00000384520 129 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 SNORA19.1-201ENST00000410656 129 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RPL39P28-201ENST00000465655 155 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 SNORA25.16-201ENST00000516741 121 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RNU6-765P-201ENST00000516916 99 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 RNU7-10P-201ENST00000607194 63 ntBASIC0.67□□□□□ -2.3
PCNX3Q9H6A9 MIR450A1-201ENST00000362262 91 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 AL035461.1-201ENST00000421490 332 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 RNU7-61P-201ENST00000515897 61 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 SNORA40.13-201ENST00000516379 120 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 MIR548H5-201ENST00000580314 60 ntBASIC0.66□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.323-201ENST00000365157 109 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 RNU6-679P-201ENST00000391003 106 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 SNORA31.14-201ENST00000516728 116 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 RNU6-1006P-201ENST00000516998 103 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 AC141557.1-201ENST00000540982 400 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 AC138869.1-201ENST00000568623 124 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 AC013244.2-201ENST00000603396 103 ntBASIC0.65□□□□□ -2.3
PCNX3Q9H6A9 Y_RNA.96-201ENST00000363092 109 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 RNU6-1014P-201ENST00000383940 103 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 MIR598-201ENST00000384868 97 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 MIR4694-201ENST00000578534 80 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 AP001318.4-201ENST00000616637 121 ntBASIC0.65□□□□□ -2.31
PCNX3Q9H6A9 RNU6-766P-201ENST00000362478 107 ntBASIC0.64□□□□□ -2.31
PCNX3Q9H6A9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.64□□□□□ -2.31
PCNX3Q9H6A9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.64□□□□□ -2.31
PCNX3Q9H6A9 SNORA7.5-201ENST00000410672 110 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms