Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 MIR4712-201ENST00000583750 82 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 AC023934.1-201ENST00000574529 2389 ntBASIC1.85□□□□□ -2.11
ATXN3LQ9H3M9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 SNORD36A-201ENST00000362874 73 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 SNORD83.1-201ENST00000411362 77 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 RNU7-106P-201ENST00000459514 67 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 SNORA25.13-201ENST00000516395 103 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 AL512310.8-201ENST00000550183 120 ntBASIC1.84□□□□□ -2.11
ATXN3LQ9H3M9 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 AC015818.7-201ENST00000428754 109 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 AC048334.1-201ENST00000477975 159 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 AC019288.1-201ENST00000557918 224 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-1296P-201ENST00000383879 107 ntBASIC1.82□□□□□ -2.12
ATXN3LQ9H3M9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.82□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-243P-201ENST00000391140 107 ntBASIC1.82□□□□□ -2.12
ATXN3LQ9H3M9 RNU7-185P-201ENST00000459215 60 ntBASIC1.82□□□□□ -2.12
ATXN3LQ9H3M9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 MIR889-201ENST00000401280 79 ntBASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 MIR1257-201ENST00000408490 117 ntBASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 MIR4536-1-201ENST00000583537 88 ntBASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 AC013244.2-201ENST00000603396 103 ntBASIC1.81□□□□□ -2.12
ATXN3LQ9H3M9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 SNORD100-201ENST00000408573 76 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 RPS27P16-201ENST00000425758 201 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-65P-201ENST00000516332 98 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
ATXN3LQ9H3M9 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 MIR101-2-201ENST00000362195 79 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-776P-201ENST00000364403 104 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 Y_RNA.283-201ENST00000364798 112 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-1022P-201ENST00000365049 104 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-811P-201ENST00000384069 107 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 RNA5SP292-201ENST00000390974 118 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 AL450471.1-201ENST00000447509 127 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 RN7SKP88-201ENST00000516847 250 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 MIR4796-201ENST00000580742 81 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 7SK.8-201ENST00000612110 250 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 7SK.11-201ENST00000615477 250 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 7SK.13-201ENST00000622040 250 ntBASIC1.79□□□□□ -2.12
ATXN3LQ9H3M9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-478P-201ENST00000363904 110 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-129P-201ENST00000391022 107 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-466P-201ENST00000391224 103 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 TRAJ51-201ENST00000504127 63 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 RNU6-75P-201ENST00000515944 104 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 SNORA31.2-201ENST00000516019 134 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 AC036111.3-201ENST00000526389 112 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 MIR4498-201ENST00000577599 66 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
ATXN3LQ9H3M9 SNORD113.3-201ENST00000364630 78 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 RNU6-934P-201ENST00000365154 107 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 RNU6-132P-201ENST00000383863 107 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
ATXN3LQ9H3M9 RNU6-957P-201ENST00000363652 99 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 MIR635-201ENST00000384830 98 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 RNU4-62P-201ENST00000410125 130 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 RNU7-195P-201ENST00000458793 62 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 AC023827.1-201ENST00000569247 97 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
ATXN3LQ9H3M9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 MIRLET7F1-201ENST00000362202 87 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 SNORA18.5-201ENST00000516616 101 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 MIR3064-201ENST00000581130 66 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 AC104996.3-201ENST00000590718 94 ntBASIC1.75□□□□□ -2.13
ATXN3LQ9H3M9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms