Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 AL442663.2-201ENST00000554385 511 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 AC007012.1-201ENST00000567192 175 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 SNORD58B-201ENST00000607313 66 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 AC025253.1-201ENST00000613623 543 ntBASIC-1.46□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 SNORD115-46-201ENST00000390982 71 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 AC002553.4-201ENST00000616896 331 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 AP001362.1-201ENST00000625165 124 ntBASIC-1.47□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 MIR582-201ENST00000365731 98 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 MIR206-201ENST00000384872 86 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 MIR616-201ENST00000385293 97 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 RNU6-287P-201ENST00000516230 98 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 RNU6-412P-201ENST00000516434 106 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 RNU6-453P-201ENST00000516819 85 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 MIR1246-201ENST00000636535 73 ntBASIC-1.48□□□□□ -2.65
UPF3BQ9BZI7 SNORA25.1-201ENST00000362326 128 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 RNU1-115P-201ENST00000365329 160 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 RNU6-559P-201ENST00000516151 98 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 MIR6874-201ENST00000635894 71 ntBASIC-1.49□□□□□ -2.65
UPF3BQ9BZI7 RNU6-845P-201ENST00000362578 103 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 RNU6-290P-201ENST00000365212 101 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 RNU6-326P-201ENST00000365480 107 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 RNU6-211P-201ENST00000384047 107 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 MIR624-201ENST00000385217 97 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 SNORA79-201ENST00000408376 140 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 MIR1277-201ENST00000408536 78 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 AC104985.2-201ENST00000620598 500 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 AC022079.1-201ENST00000621546 602 ntBASIC-1.5□□□□□ -2.65
UPF3BQ9BZI7 SNORA2.1-201ENST00000363089 137 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 SNORD74.6-201ENST00000364796 70 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 SNORD81.2-201ENST00000365153 76 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 MIR527-201ENST00000385244 85 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 AC021146.9-201ENST00000512503 156 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 RNU6-561P-201ENST00000516222 102 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 AC138207.3-201ENST00000585289 166 ntBASIC-1.51□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 RNU6-540P-201ENST00000384622 101 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 RNU6-592P-201ENST00000411333 103 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 AC091912.2-201ENST00000624798 167 ntBASIC-1.52□□□□□ -2.65
UPF3BQ9BZI7 UBE2WP1-201ENST00000362030 340 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 RNU6-978P-201ENST00000364371 103 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 RNU6-746P-201ENST00000384112 109 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 RNU4-43P-201ENST00000410628 137 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 RNA5SP272-201ENST00000516095 111 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 AC113139.1-201ENST00000605049 239 ntBASIC-1.53□□□□□ -2.65
UPF3BQ9BZI7 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 SNORD2-201ENST00000459163 69 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 AC069439.1-201ENST00000494739 167 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 RNU2-35P-201ENST00000516446 142 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 SNORD116-25-201ENST00000516517 92 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 AC037487.3-201ENST00000606668 112 ntBASIC-1.54□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 RNU6-728P-201ENST00000365375 104 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 SNORD116-29-201ENST00000384516 83 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 AC107027.2-201ENST00000512197 115 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 MIR6818-201ENST00000621576 65 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 MTND4LP32-201ENST00000636111 270 ntBASIC-1.55□□□□□ -2.66
UPF3BQ9BZI7 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 RNU6-472P-201ENST00000384299 107 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 MIR516A2-201ENST00000384888 90 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 MIR516A1-201ENST00000385033 90 ntBASIC-1.56□□□□□ -2.66
UPF3BQ9BZI7 RNY4P36-201ENST00000391116 96 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms