Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
KRTAP3-1Q9BYR8 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
KRTAP3-1Q9BYR8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP3-1Q9BYR8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP3-1Q9BYR8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP3-1Q9BYR8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR422A-201ENST00000362286 90 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR17-201ENST00000385012 84 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU1-119P-201ENST00000391122 165 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 EEF1A1P41-201ENST00000414667 207 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 AC022018.1-201ENST00000430685 241 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-977P-201ENST00000516411 103 ntBASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP3-1Q9BYR8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 AL359511.1-201ENST00000402970 211 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 RNA5SP21-201ENST00000410917 96 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 AC110620.1-201ENST00000416042 228 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU7-24P-201ENST00000458867 62 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORA84-201ENST00000459229 133 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR3198-2-201ENST00000577868 80 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR4444-1-201ENST00000581696 74 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR4444-2-201ENST00000584390 74 ntBASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORD115-24-201ENST00000363528 82 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORA38.1-201ENST00000364172 131 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-1126P-201ENST00000384002 107 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 AL513328.1-201ENST00000446460 224 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 AC108938.1-201ENST00000451204 136 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 RNA5SP356-201ENST00000515972 94 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 RNA5SP402-201ENST00000517148 110 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR5092-201ENST00000583139 88 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 AC008739.3-201ENST00000603262 127 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 AC009487.2-201ENST00000420969 6821 ntBASIC1.3□□□□□ -2.2
KRTAP3-1Q9BYR8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR21-201ENST00000362134 72 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 Y_RNA.32-201ENST00000362589 110 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-668P-201ENST00000364180 107 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR100-201ENST00000385259 80 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-141P-201ENST00000410499 105 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 PRSS3P4-201ENST00000453323 162 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR8057-201ENST00000620957 69 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 AC034229.5-201ENST00000624258 185 ntBASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP3-1Q9BYR8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 RNA5SP403-201ENST00000363598 108 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-1039P-201ENST00000383931 107 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 AC087499.2-201ENST00000432861 149 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 AC067940.1-201ENST00000458411 300 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU7-90P-201ENST00000459216 62 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 RNU6-982P-201ENST00000516216 102 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 RNA5SP341-201ENST00000516261 117 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 SNORA31.14-201ENST00000516728 116 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 MIR6509-201ENST00000614603 85 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 AC012314.7-201ENST00000619693 93 ntBASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.28□□□□□ -2.2
KRTAP3-1Q9BYR8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
KRTAP3-1Q9BYR8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-495P-201ENST00000362995 107 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 RNA5SP456-201ENST00000364002 114 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 SNORA44-201ENST00000384584 132 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR617-201ENST00000385030 97 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR34B-201ENST00000385076 84 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU7-56P-201ENST00000458744 62 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU7-104P-201ENST00000459398 79 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 AL109933.3-201ENST00000619095 188 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 AC073869.9-201ENST00000641610 120 ntBASIC1.27□□□□□ -2.21
KRTAP3-1Q9BYR8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-369P-201ENST00000362515 102 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-614P-201ENST00000384369 107 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR520F-201ENST00000384824 87 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR9-1-201ENST00000385198 89 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR934-201ENST00000401241 83 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 RPL23AP83-201ENST00000434984 473 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 S100A11P2-201ENST00000467589 312 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms