Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
USB1Q9BQ65 SNORD113.3-201ENST00000364630 78 ntBASIC2.33□□□□□ -2.04
USB1Q9BQ65 Y_RNA.330-201ENST00000365230 109 ntBASIC2.33□□□□□ -2.04
USB1Q9BQ65 MIR125B2-201ENST00000385128 89 ntBASIC2.33□□□□□ -2.04
USB1Q9BQ65 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
USB1Q9BQ65 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
USB1Q9BQ65 MIR302D-201ENST00000362275 68 ntBASIC2.32□□□□□ -2.04
USB1Q9BQ65 SNORD1A-201ENST00000364968 72 ntBASIC2.32□□□□□ -2.04
USB1Q9BQ65 RNU6-1052P-201ENST00000411398 104 ntBASIC2.32□□□□□ -2.04
USB1Q9BQ65 AC079140.2-201ENST00000506193 142 ntBASIC2.32□□□□□ -2.04
USB1Q9BQ65 RNU6-719P-201ENST00000516671 104 ntBASIC2.32□□□□□ -2.04
USB1Q9BQ65 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USB1Q9BQ65 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.31□□□□□ -2.04
USB1Q9BQ65 RNU6-895P-201ENST00000384125 103 ntBASIC2.31□□□□□ -2.04
USB1Q9BQ65 MIR4771-2-201ENST00000577758 74 ntBASIC2.31□□□□□ -2.04
USB1Q9BQ65 MIR4771-1-201ENST00000582617 74 ntBASIC2.31□□□□□ -2.04
USB1Q9BQ65 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.31□□□□□ -2.04
USB1Q9BQ65 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.31□□□□□ -2.04
USB1Q9BQ65 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USB1Q9BQ65 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USB1Q9BQ65 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 RNU6-1065P-201ENST00000384513 106 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 MIR451A-201ENST00000385059 72 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USB1Q9BQ65 RNU6-165P-201ENST00000517170 99 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 MIR4435-1-201ENST00000582552 80 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.3□□□□□ -2.04
USB1Q9BQ65 U6.81-201ENST00000612550 106 ntBASIC2.3□□□□□ -2.04
USB1Q9BQ65 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 RNU6-824P-201ENST00000363724 104 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USB1Q9BQ65 SNORA24B-201ENST00000384176 131 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 AC093423.1-201ENST00000440817 142 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 RNU6-1265P-201ENST00000516342 103 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 MIR4299-201ENST00000577899 72 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 MIR3937-201ENST00000580135 106 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 AC005520.4-201ENST00000604337 90 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 MIR6817-201ENST00000615588 66 ntBASIC2.29□□□□□ -2.04
USB1Q9BQ65 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 MIR2113-201ENST00000459007 91 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 AC036111.3-201ENST00000526389 112 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 AC103810.8-201ENST00000607347 118 ntBASIC2.28□□□□□ -2.04
USB1Q9BQ65 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
USB1Q9BQ65 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
USB1Q9BQ65 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USB1Q9BQ65 MIR337-201ENST00000362281 93 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 SNORD45.1-201ENST00000363181 77 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 SNORD45A-201ENST00000384512 84 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 RNU6-535P-201ENST00000384722 107 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 RNU6-630P-201ENST00000391258 106 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 AL645939.4-201ENST00000604495 135 ntBASIC2.27□□□□□ -2.05
USB1Q9BQ65 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.27□□□□□ -2.05
USB1Q9BQ65 RNA5SP245-201ENST00000364239 121 ntBASIC2.26□□□□□ -2.05
USB1Q9BQ65 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
USB1Q9BQ65 RNU6-1057P-201ENST00000517162 102 ntBASIC2.26□□□□□ -2.05
USB1Q9BQ65 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.26□□□□□ -2.05
USB1Q9BQ65 MIR8053-201ENST00000613344 75 ntBASIC2.26□□□□□ -2.05
USB1Q9BQ65 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
USB1Q9BQ65 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
USB1Q9BQ65 MIR30A-201ENST00000385092 71 ntBASIC2.25□□□□□ -2.05
USB1Q9BQ65 SNORA11.2-201ENST00000408318 127 ntBASIC2.25□□□□□ -2.05
USB1Q9BQ65 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.25□□□□□ -2.05
USB1Q9BQ65 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.25□□□□□ -2.05
USB1Q9BQ65 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USB1Q9BQ65 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USB1Q9BQ65 MIR449A-201ENST00000362113 91 ntBASIC2.24□□□□□ -2.05
USB1Q9BQ65 RNU6-364P-201ENST00000384387 107 ntBASIC2.24□□□□□ -2.05
USB1Q9BQ65 RPS26P5-201ENST00000418544 335 ntBASIC2.24□□□□□ -2.05
USB1Q9BQ65 AC048334.1-201ENST00000477975 159 ntBASIC2.24□□□□□ -2.05
USB1Q9BQ65 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.24□□□□□ -2.05
USB1Q9BQ65 SNORA44.1-201ENST00000517031 108 ntBASIC2.24□□□□□ -2.05
USB1Q9BQ65 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
USB1Q9BQ65 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
USB1Q9BQ65 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USB1Q9BQ65 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USB1Q9BQ65 SNORD111-201ENST00000408139 94 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 RNA5SP148-201ENST00000516527 94 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 RNU6-881P-201ENST00000516813 102 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 MIR4676-201ENST00000583078 72 ntBASIC2.23□□□□□ -2.05
USB1Q9BQ65 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USB1Q9BQ65 SNORA25.4-201ENST00000363666 124 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 RNA5SP456-201ENST00000364002 114 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 SNORD115-22-201ENST00000364456 82 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
USB1Q9BQ65 RNU6-1177P-201ENST00000391058 104 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 SNORA75.2-201ENST00000391138 150 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 SNORA75.3-201ENST00000391231 150 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 RNA5SP508-201ENST00000411327 119 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 RPL23AP94-201ENST00000512518 302 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 AC008608.1-201ENST00000603910 127 ntBASIC2.22□□□□□ -2.05
USB1Q9BQ65 MIR4773-1-201ENST00000637203 78 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms