Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC090897.1-201ENST00000580909 226 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 AC096720.1-201ENST00000604441 183 ntBASIC1.22□□□□□ -2.21
PNKPQ96T60 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 RNU6-170P-201ENST00000362832 104 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 SNORA72.6-201ENST00000384520 129 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 RNU6-531P-201ENST00000516694 104 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
PNKPQ96T60 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
PNKPQ96T60 SNORD45B-201ENST00000364617 72 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PNKPQ96T60 RNU6-905P-201ENST00000384434 107 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 MIR125B2-201ENST00000385128 89 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 SPINT5P-201ENST00000448174 155 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 AC109327.2-201ENST00000448339 378 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 MTND5P40-201ENST00000559945 246 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 MIR4676-201ENST00000583078 72 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
PNKPQ96T60 Y_RNA.13-201ENST00000362403 112 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 Y_RNA.107-201ENST00000363190 121 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 RNU6-640P-201ENST00000363693 105 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 Y_RNA.467-201ENST00000384297 102 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 MIR548G-201ENST00000408442 89 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 SNORA40.13-201ENST00000516379 120 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 MIR4777-201ENST00000583710 86 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 RNU6-90P-201ENST00000606352 106 ntBASIC1.19□□□□□ -2.22
PNKPQ96T60 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PNKPQ96T60 Y_RNA.93-201ENST00000363066 109 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 Y_RNA.95-201ENST00000363079 95 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 RNU6-1163P-201ENST00000364516 107 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 SNORD38.2-201ENST00000384470 69 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 MTATP8P2-201ENST00000435212 202 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 RNU7-156P-201ENST00000517214 74 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 AL078603.1-201ENST00000603824 313 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 RNU6-86P-201ENST00000606534 107 ntBASIC1.18□□□□□ -2.22
PNKPQ96T60 MIR1-1-201ENST00000362147 71 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 RNU6-1298P-201ENST00000362456 101 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 Y_RNA.466-201ENST00000384294 113 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 AC004941.2-201ENST00000427009 228 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 BX276092.1-201ENST00000427368 251 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 AC013244.2-201ENST00000603396 103 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 MIR8066-201ENST00000617280 78 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.17□□□□□ -2.22
PNKPQ96T60 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PNKPQ96T60 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
PNKPQ96T60 HSBP1P2-201ENST00000299671 229 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 RNU4-58P-201ENST00000363192 141 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 RNU6-644P-201ENST00000391155 98 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 RNU7-61P-201ENST00000515897 61 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 RNA5SP220-201ENST00000516298 104 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 MIR4804-201ENST00000581683 73 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 MIR6082-201ENST00000613604 109 ntBASIC1.16□□□□□ -2.22
PNKPQ96T60 Y_RNA.173-201ENST00000363776 113 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 RNU6-42P-201ENST00000384165 107 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 RNU6-364P-201ENST00000384387 107 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 Y_RNA.567-201ENST00000384736 106 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 RNY4P30-201ENST00000410216 95 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 AC067940.1-201ENST00000458411 300 ntBASIC1.15□□□□□ -2.23
PNKPQ96T60 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.15□□□□□ -2.23
PNKPQ96T60 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
PNKPQ96T60 Y_RNA.42-201ENST00000362660 108 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 MIR520F-201ENST00000384824 87 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 MIR489-201ENST00000384923 84 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 RNU7-102P-201ENST00000458948 62 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 RNU6-158P-201ENST00000517104 100 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 AC008608.1-201ENST00000603910 127 ntBASIC1.14□□□□□ -2.23
PNKPQ96T60 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 MIR488-201ENST00000365739 83 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 SNORD89-201ENST00000390981 114 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 RNU7-56P-201ENST00000458744 62 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 RNA5SP170-201ENST00000517150 101 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 SNORD92-201ENST00000585078 85 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 MIR6734-201ENST00000621166 68 ntBASIC1.13□□□□□ -2.23
PNKPQ96T60 MIR942-201ENST00000401111 86 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 SNRPGP12-201ENST00000449481 213 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 RNU6-162P-201ENST00000516228 103 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 RNU6-850P-201ENST00000516934 103 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 MIR4439-201ENST00000583746 80 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 MIR2052-201ENST00000636055 55 ntBASIC1.12□□□□□ -2.23
PNKPQ96T60 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
PNKPQ96T60 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PNKPQ96T60 MIR101-2-201ENST00000362195 79 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 RNU6-1244P-201ENST00000363614 108 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 RNU6-813P-201ENST00000384691 107 ntBASIC1.11□□□□□ -2.23
PNKPQ96T60 RNU1-119P-201ENST00000391122 165 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms