Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-531P-201ENST00000516694 104 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CDK5RAP1Q96SZ6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-624P-201ENST00000363411 107 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 snoU13.21-201ENST00000459368 105 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR4796-201ENST00000580742 81 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR4484-201ENST00000582855 83 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 U7.4-201ENST00000614961 63 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.15
CDK5RAP1Q96SZ6 MIRLET7F1-201ENST00000362202 87 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-315P-201ENST00000362666 107 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORD36A-201ENST00000362874 73 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 AC015818.7-201ENST00000428754 109 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU7-62P-201ENST00000458856 62 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR6516-201ENST00000630554 81 ntBASIC1.64□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA63.2-201ENST00000362603 126 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 RNA5SP48-201ENST00000363969 126 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA72.6-201ENST00000384520 129 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-788P-201ENST00000390967 104 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA67.6-201ENST00000391093 99 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 Y_RNA.648-201ENST00000459455 110 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA18.5-201ENST00000516616 101 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR664A-201ENST00000626086 82 ntBASIC1.63□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR635-201ENST00000384830 98 ntBASIC1.62□□□□□ -2.15
CDK5RAP1Q96SZ6 AL606490.4-201ENST00000423117 127 ntBASIC1.62□□□□□ -2.15
CDK5RAP1Q96SZ6 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR4491-201ENST00000581087 68 ntBASIC1.62□□□□□ -2.15
CDK5RAP1Q96SZ6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 MIRLET7A1-201ENST00000362295 80 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-957P-201ENST00000363652 99 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 Y_RNA.283-201ENST00000364798 112 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-396P-201ENST00000365369 105 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-811P-201ENST00000384069 107 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-571P-201ENST00000384128 107 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA77B-201ENST00000578179 125 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR3064-201ENST00000581130 66 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR4536-1-201ENST00000583537 88 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
CDK5RAP1Q96SZ6 Y_RNA.545-201ENST00000384652 105 ntBASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 AC108667.1-201ENST00000428618 249 ntBASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 AC015688.6-201ENST00000577737 104 ntBASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-1094P-201ENST00000362416 104 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-403P-201ENST00000363163 104 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 SNORD63B-201ENST00000411005 70 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 MIR4264-201ENST00000583520 66 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 AC104996.3-201ENST00000590718 94 ntBASIC1.59□□□□□ -2.15
CDK5RAP1Q96SZ6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 SNORD93-201ENST00000408813 74 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 TRAJ51-201ENST00000504127 63 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 AP003716.2-201ENST00000528260 108 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR8063-201ENST00000621930 81 ntBASIC1.58□□□□□ -2.16
CDK5RAP1Q96SZ6 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR378A-201ENST00000362177 66 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU1-42P-201ENST00000364033 160 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-686P-201ENST00000364839 107 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-243P-201ENST00000391140 107 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 AL603825.1-201ENST00000438481 80 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU7-195P-201ENST00000458793 62 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 snoU13.17-201ENST00000458802 104 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 AC114801.3-201ENST00000510231 177 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 AC013244.2-201ENST00000603396 103 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.57□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU1-36P-201ENST00000365130 165 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 Y_RNA.491-201ENST00000384417 107 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 RPL30P7-201ENST00000479312 323 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-557P-201ENST00000516842 110 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-1015P-201ENST00000517121 99 ntBASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.56□□□□□ -2.16
CDK5RAP1Q96SZ6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 SNORD100-201ENST00000408573 76 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 SNORD83.1-201ENST00000411362 77 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR2115-201ENST00000516657 100 ntBASIC1.55□□□□□ -2.16
CDK5RAP1Q96SZ6 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms