Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 RNU6-1125P-201ENST00000363601 107 ntBASIC2.18□□□□□ -2.06
ARXQ96QS3 RNU1-42P-201ENST00000364033 160 ntBASIC2.18□□□□□ -2.06
ARXQ96QS3 RNU6-820P-201ENST00000384273 107 ntBASIC2.18□□□□□ -2.06
ARXQ96QS3 RNU6-480P-201ENST00000384332 107 ntBASIC2.18□□□□□ -2.06
ARXQ96QS3 U8.15-201ENST00000390947 134 ntBASIC2.18□□□□□ -2.06
ARXQ96QS3 RNU6-955P-201ENST00000410497 104 ntBASIC2.17□□□□□ -2.06
ARXQ96QS3 MIR18B-201ENST00000454574 71 ntBASIC2.17□□□□□ -2.06
ARXQ96QS3 AC012676.2-201ENST00000619258 186 ntBASIC2.17□□□□□ -2.06
ARXQ96QS3 AC027335.2-201ENST00000624030 375 ntBASIC2.17□□□□□ -2.06
ARXQ96QS3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.16□□□□□ -2.06
ARXQ96QS3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.16□□□□□ -2.06
ARXQ96QS3 snoU13.25-201ENST00000458945 104 ntBASIC2.16□□□□□ -2.06
ARXQ96QS3 SNORD53B-201ENST00000577887 78 ntBASIC2.16□□□□□ -2.06
ARXQ96QS3 MIR30D-201ENST00000362283 70 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 RNU6-53P-201ENST00000365367 106 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 SNORD116-22-201ENST00000384430 92 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 RNY4P29-201ENST00000410801 97 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 SNORD79.1-201ENST00000516069 84 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.15□□□□□ -2.07
ARXQ96QS3 HSBP1P2-201ENST00000299671 229 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 SNORD58A-201ENST00000383875 65 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 RNU7-90P-201ENST00000459216 62 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 RNU6-762P-201ENST00000517107 102 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 AC103810.7-201ENST00000607821 91 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 AL157834.3-201ENST00000615543 103 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
ARXQ96QS3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.13□□□□□ -2.07
ARXQ96QS3 IGLL4P-201ENST00000614590 133 ntBASIC2.13□□□□□ -2.07
ARXQ96QS3 U6.109-201ENST00000636749 87 ntBASIC2.13□□□□□ -2.07
ARXQ96QS3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 RNU6-580P-201ENST00000365159 107 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 RNA5SP404-201ENST00000517118 132 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 MIR4421-201ENST00000578133 69 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 MIR4500-201ENST00000579472 76 ntBASIC2.12□□□□□ -2.07
ARXQ96QS3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ARXQ96QS3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ARXQ96QS3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ARXQ96QS3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ARXQ96QS3 Y_RNA.17-201ENST00000362433 111 ntBASIC2.11□□□□□ -2.07
ARXQ96QS3 RNA5SP133-201ENST00000363368 119 ntBASIC2.11□□□□□ -2.07
ARXQ96QS3 Y_RNA.205-201ENST00000364128 113 ntBASIC2.11□□□□□ -2.07
ARXQ96QS3 SNORA2B-201ENST00000384583 137 ntBASIC2.11□□□□□ -2.07
ARXQ96QS3 AC138749.4-201ENST00000563970 127 ntBASIC2.11□□□□□ -2.07
ARXQ96QS3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ARXQ96QS3 RNU6-654P-201ENST00000364373 107 ntBASIC2.1□□□□□ -2.07
ARXQ96QS3 RN7SKP12-201ENST00000516275 143 ntBASIC2.1□□□□□ -2.07
ARXQ96QS3 AC090897.1-201ENST00000580909 226 ntBASIC2.1□□□□□ -2.07
ARXQ96QS3 AC008163.1-202ENST00000636004 2889 ntBASIC2.1□□□□□ -2.07
ARXQ96QS3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.09□□□□□ -2.07
ARXQ96QS3 RNY1P1-201ENST00000364372 112 ntBASIC2.09□□□□□ -2.07
ARXQ96QS3 SNORD93-201ENST00000408813 74 ntBASIC2.09□□□□□ -2.07
ARXQ96QS3 MIR96-201ENST00000362288 78 ntBASIC2.08□□□□□ -2.08
ARXQ96QS3 Y_RNA.190-201ENST00000363964 101 ntBASIC2.08□□□□□ -2.08
ARXQ96QS3 MIR598-201ENST00000384868 97 ntBASIC2.08□□□□□ -2.08
ARXQ96QS3 RNU1-92P-201ENST00000517017 135 ntBASIC2.08□□□□□ -2.08
ARXQ96QS3 ZNF209P-201ENST00000593450 2304 ntBASIC2.08□□□□□ -2.08
ARXQ96QS3 RNU4-58P-201ENST00000363192 141 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 SNORD113.3-201ENST00000364630 78 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 SNORD48-201ENST00000364953 64 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 RNU6-571P-201ENST00000384128 107 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 RNA5SP95-201ENST00000410319 137 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 RNU7-21P-201ENST00000459430 62 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 AC062037.1-201ENST00000605302 128 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 MIR8066-201ENST00000617280 78 ntBASIC2.07□□□□□ -2.08
ARXQ96QS3 MIR494-201ENST00000349529 81 ntBASIC2.06□□□□□ -2.08
ARXQ96QS3 SNORA67.6-201ENST00000391093 99 ntBASIC2.06□□□□□ -2.08
ARXQ96QS3 AC002429.1-201ENST00000437672 148 ntBASIC2.06□□□□□ -2.08
ARXQ96QS3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ARXQ96QS3 RNU1-124P-201ENST00000363861 145 ntBASIC2.05□□□□□ -2.08
ARXQ96QS3 Y_RNA.363-201ENST00000365529 113 ntBASIC2.05□□□□□ -2.08
ARXQ96QS3 MIR1257-201ENST00000408490 117 ntBASIC2.05□□□□□ -2.08
ARXQ96QS3 Y_RNA.593-201ENST00000410292 98 ntBASIC2.05□□□□□ -2.08
ARXQ96QS3 AL353770.2-201ENST00000620024 78 ntBASIC2.05□□□□□ -2.08
ARXQ96QS3 MIR181B2-201ENST00000385004 89 ntBASIC2.04□□□□□ -2.08
ARXQ96QS3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ARXQ96QS3 SNORA75.2-201ENST00000391138 150 ntBASIC2.04□□□□□ -2.08
ARXQ96QS3 SNORA75.3-201ENST00000391231 150 ntBASIC2.04□□□□□ -2.08
ARXQ96QS3 SNORD111-201ENST00000408139 94 ntBASIC2.04□□□□□ -2.08
ARXQ96QS3 SNRPGP12-201ENST00000449481 213 ntBASIC2.04□□□□□ -2.08
ARXQ96QS3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 RNU1-36P-201ENST00000365130 165 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 Y_RNA.388-201ENST00000383919 113 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 SNORA72.6-201ENST00000384520 129 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 MIR19B1-201ENST00000384829 87 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 AC023934.1-201ENST00000574529 2389 ntBASIC2.03□□□□□ -2.08
ARXQ96QS3 RNU6-403P-201ENST00000363163 104 ntBASIC2.02□□□□□ -2.09
ARXQ96QS3 RNU6-242P-201ENST00000384359 107 ntBASIC2.02□□□□□ -2.09
ARXQ96QS3 MIR200A-201ENST00000384875 90 ntBASIC2.02□□□□□ -2.09
ARXQ96QS3 MIR4491-201ENST00000581087 68 ntBASIC2.02□□□□□ -2.09
ARXQ96QS3 MIR4668-201ENST00000582284 70 ntBASIC2.02□□□□□ -2.09
ARXQ96QS3 RNU6-934P-201ENST00000365154 107 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 RNU7-185P-201ENST00000459215 60 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 RNU6-850P-201ENST00000516934 103 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 AL513043.2-201ENST00000573941 143 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 uc_338.6-201ENST00000613544 171 ntBASIC2.01□□□□□ -2.09
ARXQ96QS3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms